Helianthus annuus (common sunflower): 110871796
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Entry
110871796 CDS
T05101
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110871796
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110871796
Surveillance factors
Other surveillance factors
110871796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
110871796
NCBI-ProteinID:
XP_021976220
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All DBs
Position
8:complement(3618015..3625097)
Genome browser
AA seq
1313 aa
AA seq
DB search
MADSKLHLSDDLISSKLSDSSWNPKVEAAGGNDEDKMLGLLDESKDHAGLDSSIPLSPQW
LYAKPNESKMEMRAPSSLSLGSSADSNAKDWRPDVTDDKKDWRKIANETENSRRWREEER
ETGLLGRRDRRKTDNRRVDGGRDTTDTRVAPTTERWHDAGSRNPTHEPRRDSKWSSRWGP
DEKDKEARSEKKTYVEKEDNHGENQTHSSTIRLTSERDPDSRDKWRPKHRMEASSTAPGS
FRAAPGFGLEKGRADGPTTGFTVGRGRASGTLARPSSAGSTETNASVPGKAVFSAGMFFY
PRGKLLDIYRTQKLDPCFANMPEKIEQVSSITEVTAVEPLAFVAPDKDEEAILGDIWKGI
ITSSEVSYSPFPKARAPENIADAGKDDNLSSVEELVDPKKLESTLHFNDPNYNLTYGEQS
VPEMESYEGNTTRSKSGFIVSNHDDTASSKVTDSAFMKHQLFDDVVTNERSNDSNSLFAM
SSSSEQYWSGNMQQQPIRGSINKHLASGIPPEELSLFYCDPQGEIQGPFLGVDIISWFEQ
GFFGAELPVRVVDAPEGTPFEELGDVMPHLKAAQSYTNDADVAVPASVSEMGVLTEDPRW
QLAGNNGLSTKSYSEGQGFHDEEILFPGNPESFVKHAVPTDLTEPGAPSQNDNKMHPFGL
LWSELEGSSLRKDQPSKIPYTSGIQQQHMNPVGGVADYRRNTLAESNLYQDAMSASNMNQ
EANHFGLAEKLRSQHIQQQLLQQHNLLSSSHLNEQRFPGQDVDHFLALQLQHQQQQQQRQ
IQLQQQMLLKEQQSRQQMLLEQLVHNQRSRTDVPRSHNALDQMLLKQQILSEMQQREQLI
QQANYGHQGHTNDLMEMMMRAKHEQQLLQREQLRQLALRQRVEMEEERQLGTDWFHRVNS
PGLGSSDLSQLERNLSMQERNLSMQERIQHGLYDSNPLPFERSLSMPGGGPGINLDVAGR
FSSTNNSLNPNNFRSSHLDMMEGPISNEWMESRIQQLHINNEKQKREMEARRNSEEQSQW
MSSGTSDDTSKRLLMELLHQKPSNQPTEPLDINSGLNSGLNHHPFGVVGSYGSSPGTTMN
DNIMGFKAHEESLGPLNMSTETQEGMMTQQGGGTAIDHNIMTVNAVARHNSQNIGDLYMD
NMGPSDSFPVDVKDRVTGASRRPESILLKRPPVPRAASTHEGLSELASNSDIRGRSIPTI
ISPEGGRREAVGNVANQANDNATAGKKDVRFRRTSSCSDADVPETASFSDMLKSNAKKDN
NAAAAAALESADGQGGKTGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcaagcttcatctctccgacgatctcatctcctccaaactctctgatagt
tcatggaatccgaaagtagaagctgcaggtgggaacgatgaggacaagatgctgggtttg
ctagatgagtctaaagatcatgcaggtctggatagcagcatccccttgtctcctcagtgg
ctttatgctaaaccaaatgagagtaagatggaaatgcgtgcaccaagttctctctctctt
ggaagttctgctgattccaatgcgaaggactggcgtccagatgtgaccgatgacaaaaaa
gactggagaaaaattgcaaatgaaactgaaaattcacgccgctggcgggaagaagaaaga
gagaccggcttacttggtagaagagaccgccggaaaactgacaaccgtcgcgttgacggt
ggtcgagacaccactgatactagagttgcacctaccactgagaggtggcacgatgccggg
agccgtaatcctactcatgaaccccgtcgtgatagtaaatggtcgtctaggtggggccca
gacgaaaaggataaggaagccaggtccgaaaagaagacatatgttgagaaggaagataat
catggtgaaaatcaaacgcattcaagcaccataagattaacatccgagcgagatcccgac
tcccgtgataaatggaggccaaaacacaggatggaggcgagttctaccgcaccgggttcc
ttccgggctgcaccagggttcgggctggagaaaggacgtgctgatggtccaaccacaggc
ttcaccgttggtcgtggcagggctagtggaacacttgcgaggccttcatctgcaggatct
acggaaaccaatgctagcgttcctggaaaggctgttttttctgctggcatgtttttttat
ccaaggggaaagcttcttgatatataccgtacacagaaacttgacccttgttttgctaac
atgcctgagaaaatcgagcaagtatcttctataacagaagtgactgctgttgaaccactt
gcttttgttgcgcctgataaagatgaggaggctattcttggtgatatatggaaggggatt
attacaagtagtgaggtgtcttacagtccttttccaaaggccagggcacctgagaatatc
gcagatgctggaaaagatgataatctctcatcggtggaggaactggttgatccaaagaaa
ctggagagtacgctacattttaatgatcctaattataacttgacatatggggagcaaagc
gttccagaaatggagtcatatgaagggaatacaacaaggtcaaagagtggatttatagtc
agcaatcatgatgatactgctagttctaaagttaccgattcagctttcatgaagcatcag
ctgtttgatgatgtggtaacgaacgagcgttcaaatgattcaaactcactttttgccatg
tcatcgtcatctgagcaatattggtctggaaatatgcagcagcagcccataaggggtagt
ataaacaaacatttggctagtggtataccgcctgaggagttaagtttgttttattgtgac
ccgcaaggtgagattcagggcccgtttctcggggttgacatcatttcgtggtttgaacaa
ggattctttggggcggaattacccgttcgtgtggtggatgcaccagaaggaactcccttt
gaggagctaggagacgttatgccgcacttaaaagctgcacagagttacaccaatgatgct
gacgtggcagtccctgcttctgtttccgagatgggtgttttaaccgaagatcctcgttgg
cagttagccggtaataacggtttatccacgaaatcatattctgagggtcaaggctttcat
gatgaagaaattttgttcccgggaaaccctgaaagttttgtgaaacacgcggttcctacc
gacttaactgaacctggtgcaccgagccagaatgacaataagatgcacccgttcgggcta
ttgtggtctgagcttgaagggtcgagtttaagaaaagaccagccatcgaaaataccctat
actagcggcattcagcagcaacatatgaacccggtcggtggtgtagctgattacagaagg
aatacgcttgcggaaagtaacttatatcaagatgccatgtcagcatccaacatgaatcaa
gaagctaatcactttggtttagcagagaaacttaggtctcaacatattcaacaacagtta
cttcaacagcataatcttttatcttcttcgcacttgaatgaacaacggtttcccggtcaa
gatgttgaccactttttggcacttcagttgcaacatcaacaacagcaacagcagaggcag
attcagcttcaacaacaaatgttactaaaagagcaacaatctagacagcaaatgctgctt
gaacaattggtacacaatcagaggtcacgtacggatgttccgaggtcccataacgcgctc
gatcaaatgcttctgaagcagcaaattttaagtgaaatgcagcaacgtgagcaattgatt
caacaagcaaattacggtcatcaagggcacacaaatgatctcatggagatgatgatgcgt
gctaaacatgaacagcagttgcttcaacgtgagcagttgagacagttggcgttgaggcag
agggttgaaatggaggaagaacgacaactcggtactgactggtttcaccgagttaactca
cctgggctcggttcttcagatttgagtcagctcgaacggaacctctcgatgcaagaacgg
aatctttcgatgcaggaacgcattcaacacgggctttatgattcaaacccgttaccgttt
gaacggtcgttgtcaatgccaggtggcggacccggaattaatctcgacgttgcaggccga
ttttcttccactaacaattctttaaaccctaataatttccgttcctcacatttggatatg
atggaaggaccgatatcaaatgagtggatggaatcacggattcaacaattacatattaat
aacgaaaaacagaaacgagaaatggaagcaagaaggaactcggaggaacaaagtcaatgg
atgtctagtgggaccagtgacgacacctcaaaacgactgcttatggaactactacaccag
aaaccatccaatcaacccactgaaccgctagatataaacagtggactaaatagtggacta
aaccatcacccatttggtgttgttggatcttatggctcgagtcctggtacaaccatgaat
gacaatataatgggctttaaagcccatgaagagagcctgggcccattaaatatgagtaca
gaaactcaagaaggtatgatgactcagcagggtggtggtactgctatagatcacaatata
atgacagttaatgctgttgccagacataactcacaaaatattggcgacttgtacatggac
aacatgggaccctctgattcttttccagtagacgttaaagatcgggtgacaggtgcatct
agaaggcccgaaagtattttactgaaacgccctccggtcccacgtgcagcctcaacacat
gaaggactatctgagctggcgtcaaattcagatatcagagggaggagtatccctaccatt
atatctcccgaaggcgggagacgagaagcagtaggcaatgtagcaaatcaagcgaatgac
aatgcgacagctggcaagaaggatgttcgttttaggagaacatcgtcttgtagtgatgct
gacgtgccggagacggcatcgtttagtgacatgcttaaaagcaatgctaagaaagataat
aatgctgcggctgctgctgctttagaaagtgcggatggacaagggggtaaaaccggaaag
aaaaaaggtaaaaaagggaggcaaattgatccggcgcttctagggtttaaggttaccagt
aaccgaataatgatgggcgagattcaacgtatagaagattaa
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