Helianthus annuus (common sunflower): 110872019
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Entry
110872019 CDS
T05101
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110872019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110872019
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110872019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
110872019
NCBI-ProteinID:
XP_021976467
LinkDB
All DBs
Position
8:10137111..10162775
Genome browser
AA seq
1792 aa
AA seq
DB search
MPLFLSDEEYARCNHDPSLITQKADAYIRELHNQLDTEKSQHDAASVTAEQTCSLLEHKY
VSLKSEFDTLQAQCSQLSSSLEERVSEVAQIQADKHQIYLQSIGKDGEIERLSLETSELQ
KSKSQLLQLIEHKDLEINEKNSSIKGYLDKIVSMTDSASSKDSRIIELEAEHARMNASSA
RLTQEKELVERHNLWLNDELTTKVNSLLELRKVHNELEADMSSKLAELERKYNETSSSLK
WKDDRVNELESKLEALQAEICSSKEMAAATEERLSTELSTVNKLVELYKENSDEWSKKSG
ELEGVIKALETHASQLEKDYKERLSNETSARIQFETEVSLLKEKFQQCEKELETYRNSDH
NLLQLSSFNTKAYEDNNNNNNPMLVPSVPAGISGTALAASLLRDGWSLVKMYEKYQEAVD
ALRHEEFGRKHSQSVLERVLHEIEEKAEVILDERVEHERMLEAYTTLNEKLQHSLSEQTV
LEKTAQELKAEVKKHKRDYGLAQKENNDLQKQVTVLLKECRDVQMRCGSVNNDSVEVQMD
VNLDSDDGFSDRMLTFKDINGLVEQNVQLRGVVRLLTEQIETKEVELKENFEKEFQKQCK
ETASKVDAVLARAEEQTQMIDSLHTSVAMYKKLYEEEHKRHVPQLQSSDPAPVDVRNIVR
QSEAFYDSSSKKAKEKAYERIKLLEEEITGIRSEIITLRSERDKLTSESTFANEKLDRFM
KDFDRQREEMNGVIARNVEFSQLIVDYQRKIREASESLHIAEDLSRKLNMEVSVLKREKE
ILINSEKRAFEEVGSMSERVHQLQTTLNTIQSAEEVREESRNAQRLSQEDYVKRTERDWA
EAKNELQKERDNIRKLTLEHESAMRGSMQRIEEMGKELANALHAVSVANTRASAAEERVS
QFEKTKSSETNIENDDTSKGDVAVLKEEIEKLKAEAKPDKDHMLQYKRLAQVNESALREM
EFRHERFKSEAEKVKKSLEDEVLSLKEQVNQLQDGYISKEKEAASAVLSQEHALASSTSE
VFKLREEITAKTLRVDGLESRISAMKDELEKEHQRWRIAQDNYERQVILQSETIQELTKT
SQELTLINEKLSELQKVSDILKTENDELKTKWETEKSVLEESKDKAEKKFNEVNEQNKIL
HDQLEALHIKLAGSVAQTSDDGGLQNVVKYLRRSKEIAETEISLLKQERLRLQSQLEAAM
KAESEAQALLRTERDNSRSVHFTEDEFKALQVQVREMNLLRESNVQLREENRHNFEECQK
LRQLFQDAKIEVENLNGLIVERQNEVEGFKREIEMQKKNMKDREDYVRLQVDFQQINVKL
SEKDGQLEEIKKRVSEKQDVIIRLERDLERSKVELDVRESKINNVVQTESLLKTEVDKQK
RLIYQLKRRCENLAKEKEETLKKNQELSDELVKRSNVDGVGELAEKDTRIQMLEKTVEKL
RDESREKEEKDTRIQMLEKIVERLRDDVKKGKEEVRIEKAKNQNTDNGIREEPKVEPRKL
ARKLIRPSIVKPEQPKGDADMSDAIDTNVQSSLRKRPSTAEAPEESNDVSVADVAPPQAK
KSRGSEQAHEVGDVCETVTEELFNPGDETQIMKEDDNTVSDYISEENATKTEIEASEDQH
KITEVAHTQLQPVTSDPEEGDFENQVRSPPPMPVEDEMPEETLAETEVSSALLTTEDDED
KHGEESEVEVEETTLENSTDKFDNDSVGNQDSSAVSGVSTSTGPTEVKPEEPVTGLRITS
LNERARQRSLQRLSGAQFSPPVTRGRGRVIRGRTRGGRTARGGGRTPGSQGM
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttgtctgacgaagagtacgctcgctgcaaccacgatccatctctgatc
acacaaaaagccgatgcgtacatcagagagttacacaatcaactcgacactgaaaaatct
caacacgatgctgcttccgtaaccgccgaacaaacgtgttcgcttctcgagcacaagtat
gtttctctcaaatcggaattcgatacgttgcaagcgcaatgttcgcaactcagttctagt
ttagaagaacgtgtctcggaagtcgctcagattcaagcggataaacaccagatttatctt
caatcgattggtaaagatggcgagattgagaggctttcactggaaacatcagagctacaa
aaatctaaaagtcaactgctacagctgatcgaacataaagatttggagattaacgagaag
aattctagcatcaagggttatcttgacaagattgtttctatgaccgacagtgcttcttct
aaagattcacggattatcgaactggaagccgagcatgcacgcatgaacgcttcttcagct
cgtttgactcaagagaaagaattagttgagagacataatctttggcttaatgacgagttg
accaccaaagtcaacagtcttctggagctaagaaaggtacataatgaactagaggctgat
atgtcgtctaagcttgcagaacttgaaagaaagtacaatgaaacttctagctcgttgaag
tggaaggatgatagagtcaacgaactcgagtcaaagcttgaagccttacaggctgagata
tgctcatctaaagagatggctgctgcaactgaagagcggttgtctactgagctgtcgact
gtaaacaaacttgttgaactctacaaagagaattcagacgagtggtcgaaaaagtccgga
gagcttgaaggtgttatcaaggctttagagacacacgcaagtcaacttgaaaaagattat
aaagaacgcctttctaacgaaacatctgcaagaatacaattcgaaactgaagtttcactt
ttgaaagaaaagtttcaacagtgtgaaaaagaattggaaacttaccgaaattcggaccat
aatcttcttcagcttagcagtttcaacactaaagcatatgaagataataataataataat
aatccaatgcttgttcccagtgttccggcaggtatttcaggtacagcactagctgcttct
cttcttcgtgacggttggagtttagttaaaatgtacgagaagtaccaagaagctgttgat
gctttgagacacgaggaattcggaagaaaacattcacaatcagtgctagaacgtgttttg
catgaaatagaagagaaagctgaggtcatattagatgaacgtgtagaacacgaaagaatg
cttgaagcgtacactacgttaaatgaaaagctgcagcattctctctctgaacaaactgtt
cttgagaaaaccgctcaagagttgaaggctgaagtaaaaaaacacaaacgtgactatggt
ttagctcaaaaagaaaacaacgatcttcagaaacaggtgacggttttattgaaagaatgt
cgtgacgtacaaatgcgttgtgggtccgtcaataacgattctgttgaagttcagatggat
gttaatttggattccgatgatggtttctctgaccggatgttgacttttaaggatataaac
ggtttagttgagcagaatgtacagcttcggggtgtagttcgtcttttaactgagcaaatc
gagactaaagaagttgagttaaaggagaatttcgagaaggaatttcaaaaacagtgtaaa
gaaactgcttctaaagttgatgcggtattggctagagccgaagaacaaacacaaatgatc
gactcacttcatacttctgttgctatgtacaagaagttatatgaagaagaacataaacga
cacgttcctcaactgcaatcttcagatcccgcaccagttgacgtaagaaacattgttcga
caatctgaagctttttatgattcttcttcaaaaaaggcaaaggaaaaggcgtatgaaagg
ataaagcttctagaagaagagataacaggtattagaagcgagatcattacattaaggtca
gaacgcgacaagttgacttcagagtcaacttttgctaatgagaaactcgacagatttatg
aaagattttgaccgtcaacgggaagaaatgaacggtgttatagcgcgaaatgttgaattc
tcacagttgatagttgattaccaaagaaagatacgtgaagcttctgaatcgttgcatatc
gcagaagacttgtcacgcaagctaaatatggaggtctcggttttaaaacgtgaaaaagaa
atattaataaattctgaaaaacgagcgtttgaggaggttggtagtatgtcggaaagagtt
catcagttgcaaactactttgaatacaattcaaagtgctgaagaggtgcgggaagaatct
agaaacgctcagcgtttaagtcaagaggattacgttaaaagaaccgaacgggattgggct
gaggcgaaaaacgagcttcaaaaagaacgggataacattcgtaagctaacactcgagcat
gaatcagctatgcgagggtccatgcaaagaatcgaggaaatgggaaaagaattagctaac
gcgttacatgctgtttcggttgctaatactcgcgcttctgctgccgaagaacgtgtatct
cagtttgagaaaacaaagagttcggaaacaaacattgaaaatgatgatacgtcaaaaggc
gatgtggctgtgttgaaggaggagattgagaaactgaaagcagaagctaaaccggataaa
gaccacatgttgcagtacaagagattagcacaagtgaatgaatctgcattaagagaaatg
gaattccgacacgaacggtttaaatccgaggcggaaaaggtgaagaagtcgttagaagat
gaagttttatcgttaaaagagcaggtaaatcagcttcaagacggttatatctcaaaggaa
aaagaagcagcttctgctgttttatcacaggaacacgctcttgcatcttcaacgtcagag
gtttttaagttacgggaagaaattaccgcaaaaacgttgcgtgtagacggtttagagtca
cgaatctcagccatgaaagatgagttggagaaagagcaccaacgatggcgtattgctcaa
gacaattacgaaaggcaggttatattgcagtctgaaacgattcaggagttgactaaaaca
tcacaagagttgaccttaattaacgaaaagttatccgaactccagaaagtatccgacata
ctaaaaaccgaaaacgacgagctaaaaaccaagtgggagactgaaaagtcggttctagaa
gagtccaaagataaagcagagaaaaagtttaacgaagttaacgaacaaaacaaaatattg
catgatcaactcgaagcattgcacatcaagcttgcgggttccgttgcgcaaacttctgat
gatggtgggttacagaacgtggtgaagtatttgaggcggtcaaaagagattgcggagacc
gagatctcgttattaaagcaggaaaggctacggttacagtcacagctcgaggctgctatg
aaggccgaatcagaagctcaagcgttacttcgtactgaacgggataattctcgatcagtg
catttcacagaggatgagtttaaagcgttacaggttcaagttagagaaatgaatttgctt
cgagaaagtaatgtacagcttagagaagaaaatcgacacaattttgaagaatgtcaaaaa
ttacgtcagttgttccaagatgctaaaattgaagtcgagaatttgaacggcttgattgtc
gaaaggcaaaacgaagtggaaggttttaagagagaaatagagatgcaaaagaagaacatg
aaagatcgtgaagattatgttcgattgcaagtagatttccaacagataaacgtgaaatta
tccgagaaagatggacaattggaggagattaagaaacgtgtttccgaaaaacaagacgtg
ataatacggttggagcgggatcttgaaagaagcaaagtggaattagatgtacgagagtcg
aagataaacaacgttgtgcaaaccgagagtttgttaaaaacagaagttgacaaacagaag
agactcatttatcagttgaagcgcagatgcgagaatttggcgaaagaaaaggaggaaaca
ttgaagaagaatcaagaactttctgacgagttagttaaaagaagcaacgtagacggtgta
ggtgaactagcagagaaagatacacggattcagatgcttgaaaaaacggttgagaagtta
cgagacgagtctagagaaaaagaagaaaaagatacgagaatacagatgctggagaaaatt
gtcgaaaggctaagagatgatgtcaaaaagggtaaagaagaagtccggattgaaaaagcg
aagaatcaaaataccgataatggaattcgcgaagaaccgaaagttgaaccacgtaagctt
gcacgaaagttaatccgacctagtattgtaaagccggagcaaccgaagggtgatgcggat
atgtcagatgccattgatactaatgtccagtcctctttacgcaaacgcccgtctactgca
gaagcaccggaagaatcaaatgatgtcagcgttgctgacgtggcgccacctcaagctaag
aaatcaagaggttcagaacaagcgcatgaggtcggcgatgtatgtgaaactgtcactgaa
gagttattcaatccgggggatgaaactcaaattatgaaagaggatgataatactgtaagt
gactatattagtgaagagaatgcgaccaaaactgaaatcgaggcgtctgaggaccagcat
aagattactgaggtggcgcacacacaattgcagcccgtaacaagtgatcctgaagaggga
gattttgagaatcaggttaggtcacctccacccatgccggttgaagatgaaatgccggaa
gaaaccttagcggaaacggaggtgagttccgctttgctaactacggaggatgatgaagac
aaacacggagaagaaagtgaagtagaagtagaagagaccaccctcgagaattcaacagat
aagttcgataacgacagtgttggtaatcaagatagtagtgccgttagcggtgtctccaca
tcaacagggcccacagaagtaaaaccagaggagccggttacgggtttgcgcatcactagt
ttgaatgagagagcaaggcagaggtctctgcaaaggctgtctggagcgcaattttcgcca
cctgtcactaggggtcgtggaagggttatacgtggtcgaacccgtggtggacggactgcc
cgtggtggtggtcgaacacctggctctcaaggaatgtga
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integrated database retrieval system