KEGG   Helianthus annuus (common sunflower): 110872019
Entry
110872019         CDS       T05101                                 
Name
(RefSeq) nuclear-pore anchor isoform X1
  KO
K09291  nucleoprotein TPR
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110872019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110872019
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110872019
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 110872019
NCBI-ProteinID: XP_021976467
LinkDB
Position
8:10137111..10162775
AA seq 1792 aa
MPLFLSDEEYARCNHDPSLITQKADAYIRELHNQLDTEKSQHDAASVTAEQTCSLLEHKY
VSLKSEFDTLQAQCSQLSSSLEERVSEVAQIQADKHQIYLQSIGKDGEIERLSLETSELQ
KSKSQLLQLIEHKDLEINEKNSSIKGYLDKIVSMTDSASSKDSRIIELEAEHARMNASSA
RLTQEKELVERHNLWLNDELTTKVNSLLELRKVHNELEADMSSKLAELERKYNETSSSLK
WKDDRVNELESKLEALQAEICSSKEMAAATEERLSTELSTVNKLVELYKENSDEWSKKSG
ELEGVIKALETHASQLEKDYKERLSNETSARIQFETEVSLLKEKFQQCEKELETYRNSDH
NLLQLSSFNTKAYEDNNNNNNPMLVPSVPAGISGTALAASLLRDGWSLVKMYEKYQEAVD
ALRHEEFGRKHSQSVLERVLHEIEEKAEVILDERVEHERMLEAYTTLNEKLQHSLSEQTV
LEKTAQELKAEVKKHKRDYGLAQKENNDLQKQVTVLLKECRDVQMRCGSVNNDSVEVQMD
VNLDSDDGFSDRMLTFKDINGLVEQNVQLRGVVRLLTEQIETKEVELKENFEKEFQKQCK
ETASKVDAVLARAEEQTQMIDSLHTSVAMYKKLYEEEHKRHVPQLQSSDPAPVDVRNIVR
QSEAFYDSSSKKAKEKAYERIKLLEEEITGIRSEIITLRSERDKLTSESTFANEKLDRFM
KDFDRQREEMNGVIARNVEFSQLIVDYQRKIREASESLHIAEDLSRKLNMEVSVLKREKE
ILINSEKRAFEEVGSMSERVHQLQTTLNTIQSAEEVREESRNAQRLSQEDYVKRTERDWA
EAKNELQKERDNIRKLTLEHESAMRGSMQRIEEMGKELANALHAVSVANTRASAAEERVS
QFEKTKSSETNIENDDTSKGDVAVLKEEIEKLKAEAKPDKDHMLQYKRLAQVNESALREM
EFRHERFKSEAEKVKKSLEDEVLSLKEQVNQLQDGYISKEKEAASAVLSQEHALASSTSE
VFKLREEITAKTLRVDGLESRISAMKDELEKEHQRWRIAQDNYERQVILQSETIQELTKT
SQELTLINEKLSELQKVSDILKTENDELKTKWETEKSVLEESKDKAEKKFNEVNEQNKIL
HDQLEALHIKLAGSVAQTSDDGGLQNVVKYLRRSKEIAETEISLLKQERLRLQSQLEAAM
KAESEAQALLRTERDNSRSVHFTEDEFKALQVQVREMNLLRESNVQLREENRHNFEECQK
LRQLFQDAKIEVENLNGLIVERQNEVEGFKREIEMQKKNMKDREDYVRLQVDFQQINVKL
SEKDGQLEEIKKRVSEKQDVIIRLERDLERSKVELDVRESKINNVVQTESLLKTEVDKQK
RLIYQLKRRCENLAKEKEETLKKNQELSDELVKRSNVDGVGELAEKDTRIQMLEKTVEKL
RDESREKEEKDTRIQMLEKIVERLRDDVKKGKEEVRIEKAKNQNTDNGIREEPKVEPRKL
ARKLIRPSIVKPEQPKGDADMSDAIDTNVQSSLRKRPSTAEAPEESNDVSVADVAPPQAK
KSRGSEQAHEVGDVCETVTEELFNPGDETQIMKEDDNTVSDYISEENATKTEIEASEDQH
KITEVAHTQLQPVTSDPEEGDFENQVRSPPPMPVEDEMPEETLAETEVSSALLTTEDDED
KHGEESEVEVEETTLENSTDKFDNDSVGNQDSSAVSGVSTSTGPTEVKPEEPVTGLRITS
LNERARQRSLQRLSGAQFSPPVTRGRGRVIRGRTRGGRTARGGGRTPGSQGM
NT seq 5379 nt   +upstreamnt  +downstreamnt
atgcctctgttcttgtctgacgaagagtacgctcgctgcaaccacgatccatctctgatc
acacaaaaagccgatgcgtacatcagagagttacacaatcaactcgacactgaaaaatct
caacacgatgctgcttccgtaaccgccgaacaaacgtgttcgcttctcgagcacaagtat
gtttctctcaaatcggaattcgatacgttgcaagcgcaatgttcgcaactcagttctagt
ttagaagaacgtgtctcggaagtcgctcagattcaagcggataaacaccagatttatctt
caatcgattggtaaagatggcgagattgagaggctttcactggaaacatcagagctacaa
aaatctaaaagtcaactgctacagctgatcgaacataaagatttggagattaacgagaag
aattctagcatcaagggttatcttgacaagattgtttctatgaccgacagtgcttcttct
aaagattcacggattatcgaactggaagccgagcatgcacgcatgaacgcttcttcagct
cgtttgactcaagagaaagaattagttgagagacataatctttggcttaatgacgagttg
accaccaaagtcaacagtcttctggagctaagaaaggtacataatgaactagaggctgat
atgtcgtctaagcttgcagaacttgaaagaaagtacaatgaaacttctagctcgttgaag
tggaaggatgatagagtcaacgaactcgagtcaaagcttgaagccttacaggctgagata
tgctcatctaaagagatggctgctgcaactgaagagcggttgtctactgagctgtcgact
gtaaacaaacttgttgaactctacaaagagaattcagacgagtggtcgaaaaagtccgga
gagcttgaaggtgttatcaaggctttagagacacacgcaagtcaacttgaaaaagattat
aaagaacgcctttctaacgaaacatctgcaagaatacaattcgaaactgaagtttcactt
ttgaaagaaaagtttcaacagtgtgaaaaagaattggaaacttaccgaaattcggaccat
aatcttcttcagcttagcagtttcaacactaaagcatatgaagataataataataataat
aatccaatgcttgttcccagtgttccggcaggtatttcaggtacagcactagctgcttct
cttcttcgtgacggttggagtttagttaaaatgtacgagaagtaccaagaagctgttgat
gctttgagacacgaggaattcggaagaaaacattcacaatcagtgctagaacgtgttttg
catgaaatagaagagaaagctgaggtcatattagatgaacgtgtagaacacgaaagaatg
cttgaagcgtacactacgttaaatgaaaagctgcagcattctctctctgaacaaactgtt
cttgagaaaaccgctcaagagttgaaggctgaagtaaaaaaacacaaacgtgactatggt
ttagctcaaaaagaaaacaacgatcttcagaaacaggtgacggttttattgaaagaatgt
cgtgacgtacaaatgcgttgtgggtccgtcaataacgattctgttgaagttcagatggat
gttaatttggattccgatgatggtttctctgaccggatgttgacttttaaggatataaac
ggtttagttgagcagaatgtacagcttcggggtgtagttcgtcttttaactgagcaaatc
gagactaaagaagttgagttaaaggagaatttcgagaaggaatttcaaaaacagtgtaaa
gaaactgcttctaaagttgatgcggtattggctagagccgaagaacaaacacaaatgatc
gactcacttcatacttctgttgctatgtacaagaagttatatgaagaagaacataaacga
cacgttcctcaactgcaatcttcagatcccgcaccagttgacgtaagaaacattgttcga
caatctgaagctttttatgattcttcttcaaaaaaggcaaaggaaaaggcgtatgaaagg
ataaagcttctagaagaagagataacaggtattagaagcgagatcattacattaaggtca
gaacgcgacaagttgacttcagagtcaacttttgctaatgagaaactcgacagatttatg
aaagattttgaccgtcaacgggaagaaatgaacggtgttatagcgcgaaatgttgaattc
tcacagttgatagttgattaccaaagaaagatacgtgaagcttctgaatcgttgcatatc
gcagaagacttgtcacgcaagctaaatatggaggtctcggttttaaaacgtgaaaaagaa
atattaataaattctgaaaaacgagcgtttgaggaggttggtagtatgtcggaaagagtt
catcagttgcaaactactttgaatacaattcaaagtgctgaagaggtgcgggaagaatct
agaaacgctcagcgtttaagtcaagaggattacgttaaaagaaccgaacgggattgggct
gaggcgaaaaacgagcttcaaaaagaacgggataacattcgtaagctaacactcgagcat
gaatcagctatgcgagggtccatgcaaagaatcgaggaaatgggaaaagaattagctaac
gcgttacatgctgtttcggttgctaatactcgcgcttctgctgccgaagaacgtgtatct
cagtttgagaaaacaaagagttcggaaacaaacattgaaaatgatgatacgtcaaaaggc
gatgtggctgtgttgaaggaggagattgagaaactgaaagcagaagctaaaccggataaa
gaccacatgttgcagtacaagagattagcacaagtgaatgaatctgcattaagagaaatg
gaattccgacacgaacggtttaaatccgaggcggaaaaggtgaagaagtcgttagaagat
gaagttttatcgttaaaagagcaggtaaatcagcttcaagacggttatatctcaaaggaa
aaagaagcagcttctgctgttttatcacaggaacacgctcttgcatcttcaacgtcagag
gtttttaagttacgggaagaaattaccgcaaaaacgttgcgtgtagacggtttagagtca
cgaatctcagccatgaaagatgagttggagaaagagcaccaacgatggcgtattgctcaa
gacaattacgaaaggcaggttatattgcagtctgaaacgattcaggagttgactaaaaca
tcacaagagttgaccttaattaacgaaaagttatccgaactccagaaagtatccgacata
ctaaaaaccgaaaacgacgagctaaaaaccaagtgggagactgaaaagtcggttctagaa
gagtccaaagataaagcagagaaaaagtttaacgaagttaacgaacaaaacaaaatattg
catgatcaactcgaagcattgcacatcaagcttgcgggttccgttgcgcaaacttctgat
gatggtgggttacagaacgtggtgaagtatttgaggcggtcaaaagagattgcggagacc
gagatctcgttattaaagcaggaaaggctacggttacagtcacagctcgaggctgctatg
aaggccgaatcagaagctcaagcgttacttcgtactgaacgggataattctcgatcagtg
catttcacagaggatgagtttaaagcgttacaggttcaagttagagaaatgaatttgctt
cgagaaagtaatgtacagcttagagaagaaaatcgacacaattttgaagaatgtcaaaaa
ttacgtcagttgttccaagatgctaaaattgaagtcgagaatttgaacggcttgattgtc
gaaaggcaaaacgaagtggaaggttttaagagagaaatagagatgcaaaagaagaacatg
aaagatcgtgaagattatgttcgattgcaagtagatttccaacagataaacgtgaaatta
tccgagaaagatggacaattggaggagattaagaaacgtgtttccgaaaaacaagacgtg
ataatacggttggagcgggatcttgaaagaagcaaagtggaattagatgtacgagagtcg
aagataaacaacgttgtgcaaaccgagagtttgttaaaaacagaagttgacaaacagaag
agactcatttatcagttgaagcgcagatgcgagaatttggcgaaagaaaaggaggaaaca
ttgaagaagaatcaagaactttctgacgagttagttaaaagaagcaacgtagacggtgta
ggtgaactagcagagaaagatacacggattcagatgcttgaaaaaacggttgagaagtta
cgagacgagtctagagaaaaagaagaaaaagatacgagaatacagatgctggagaaaatt
gtcgaaaggctaagagatgatgtcaaaaagggtaaagaagaagtccggattgaaaaagcg
aagaatcaaaataccgataatggaattcgcgaagaaccgaaagttgaaccacgtaagctt
gcacgaaagttaatccgacctagtattgtaaagccggagcaaccgaagggtgatgcggat
atgtcagatgccattgatactaatgtccagtcctctttacgcaaacgcccgtctactgca
gaagcaccggaagaatcaaatgatgtcagcgttgctgacgtggcgccacctcaagctaag
aaatcaagaggttcagaacaagcgcatgaggtcggcgatgtatgtgaaactgtcactgaa
gagttattcaatccgggggatgaaactcaaattatgaaagaggatgataatactgtaagt
gactatattagtgaagagaatgcgaccaaaactgaaatcgaggcgtctgaggaccagcat
aagattactgaggtggcgcacacacaattgcagcccgtaacaagtgatcctgaagaggga
gattttgagaatcaggttaggtcacctccacccatgccggttgaagatgaaatgccggaa
gaaaccttagcggaaacggaggtgagttccgctttgctaactacggaggatgatgaagac
aaacacggagaagaaagtgaagtagaagtagaagagaccaccctcgagaattcaacagat
aagttcgataacgacagtgttggtaatcaagatagtagtgccgttagcggtgtctccaca
tcaacagggcccacagaagtaaaaccagaggagccggttacgggtttgcgcatcactagt
ttgaatgagagagcaaggcagaggtctctgcaaaggctgtctggagcgcaattttcgcca
cctgtcactaggggtcgtggaagggttatacgtggtcgaacccgtggtggacggactgcc
cgtggtggtggtcgaacacctggctctcaaggaatgtga

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