Helianthus annuus (common sunflower): 110872106
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Entry
110872106 CDS
T05101
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110872106
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110872106
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110872106
03036 Chromosome and associated proteins [BR:
han03036
]
110872106
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110872106
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110872106
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110872106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
RTP1_C1
Adaptin_N
CLASP_N
Cnd1
TPR_TNPO3_IPO13_3rd
IFRD
Motif
Other DBs
NCBI-GeneID:
110872106
NCBI-ProteinID:
XP_021976566
LinkDB
All DBs
Position
8:12551406..12558342
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGIEFAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFVPLVKRLAAGEWFTARVSACGLFHIAYPSASEPLKAELRSVFSQLCQDDMPMVR
RAAATNLGKFAATVEPAHLKTDIMQIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPDWAMQHIVPQV
LDMIKNPHYLYRMTVLRAISLLAPVMGSEITCSKLLPVVVTASKDRVPNIKFNVAKVLQS
LVPIVDHSVVEKSIKPCLVELAEDPDVDVRYFANQALQSIDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggttgacgagcctttgtaccccatagcagtgttgatagacgagttgaagaac
gatgacatccaactgcggttgaattcgattagaagactatcgacaattgctcgtgcgtta
ggggaggaaaggactaggaaggagttgattccttttttgagtgaaaacaatgatgacgat
gatgaagttcttcttgcgatggcagaggaattgggtgtttttattccttatgttggagga
atagagtttgcacatgtgttgttacctcctcttgaaacgttatgtacggttgaagagacg
tgtgtgagggataaagctgtggagtcactatgcaggattggatcacaaatgagagagtct
gatttggttgattcttttgtacctcttgttaagaggctggcggctggtgaatggttcact
gctagagtttctgcttgtggactgtttcacattgcttatcctagtgcatcagagccgttg
aaggcggaactgaggtcggtatttagtcagttatgtcaagacgatatgccgatggtccgg
agagctgctgcaacaaacttagggaagtttgctgctacggtggaacctgctcatctcaag
acggacatcatgcaaatctttgaggatcttacgcaagacgatcaagactctgttcgttta
ctagctgttgagggttgtgctgcccttgggaagttgctagaacctcaggactgtgttgca
catattcttcctgttattgttaatttttctcaggacaaatcttggcgtgttcgctatatg
gttgctaaccagttgtacgaactatgtgaagctgtgggtcctgaaccaaccaagacggac
ttagtcccagcatatgtgaggctacttcgggataacgaagctgaagtacgtattgcggct
gctggaaaagttaccaagttcagtaggattcttagccccgaacttgcaattcagcatatt
cttccatgtgtaaaggagttgtcgtcagattcttctcagcacgttaggtctgctctggca
tctgttataatgggcatggcacctgttctaggaaaggaggcaacaatcgagcaacttctt
cccatatttctttcacttctaaaagacgagtttccagatgtacgcctcaatatcattagt
aagctagatcaagtgaaccaggttattggaatcgatcttttgtctcaatctttactgcca
gcaatcgtcgaacttgcggaagatagacattggagggttcgtttggcaatcatcgagtac
atacctctattggctagtcaattaggtgtaggattttttgatgataaactcggtgctctc
tgcatgcaatggctacaagacaaggtttactccatcagagatgctgctgcaaataaccta
aaacgccttgcagaggaattcggcccagattgggcgatgcagcacatagtcccacaggtc
ttggatatgattaagaacccacattacttgtaccgtatgacggttcttcgtgctatttct
ttactggcccctgttatgggctcagaaatcacttgttctaaactgcttcctgtagttgtt
actgcatcaaaggacagagtgccgaatatcaagtttaatgtcgcaaaggtcttgcaatct
ctagttcccatagttgaccattcggtggttgagaaaagcattaaaccgtgcctggtagag
ctggcggaggatccggatgtcgatgtgcgttattttgcgaaccaagcccttcaatcgatt
gatcaagtgatgatgtctagctaa
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