Helianthus annuus (common sunflower): 110872292
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Entry
110872292 CDS
T05101
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110872292
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110872292
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
110872292
NCBI-ProteinID:
XP_021976756
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All DBs
Position
5:99614665..99618262
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AA seq
436 aa
AA seq
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MASVSSQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFAEQNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGN
DARSVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFTDSETATSAKDALDGRSIPSYL
IPELGPCSLKITYSAHTDLSVKFQSHRSRDYTNPMLPVASSAIDATGQFSLGINGNKIES
ESNVLLASIENMQYAVTLEVLQMVFSAFGPVLKIAMFDKNGGLQALIQYPDVQTAVVAKE
ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTMPAAPMMNAQPSILGQQPPSAA
PQYNAANQYMPAPQPSAGWVQGPSAGPQSMPMQQMHNHQYMPQQGGMPPSEMGRGPTHFN
GQNGYPQGGAPPRYHQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtctcgagtcagcctcagttccggtacacgcagaccccatcaaaggttctt
catctgaggaacttgccttgggagtgcactgaagaagaattaattgaacttggaaagccc
tttggtaaagttgtcaacactaaatgtaatgttggagctaacagaaatcaagcctttatt
gagtttgctgaacaaaatcaagcaattgctatgatatcgtactacgcttcatcgtccgaa
ccggcacaggtacgagggaaaaccgtctacctacagtactccaaccggcaagaaattgtg
aacaacaaaacgtctgcagatgttgctggaaatgtacttttggtaacgattgagggtaat
gatgcccgctctgtcagcattgatgtcttacacctggtgttctctgcatttgggtttgtg
cataaaatcacaacttttgagaagacagctggatttcaggctctggtacagtttactgat
tcggaaactgctacttctgcgaaggatgctcttgacgggaggagcattcccagttatttg
attccggagctgggaccatgttctctgaagataacgtattctgcgcatacagatttgagt
gttaaattccagagtcatcgtagcagggattataccaaccctatgcttccggttgcatcc
tcagcaatagatgctactggtcagttcagtttgggtataaacgggaataagattgaatcg
gagagcaatgttcttcttgcttctattgaaaacatgcaatatgcagtcactctggaagta
ttacagatggtgttctctgcttttggccctgtcttgaagattgcaatgtttgacaaaaat
ggaggacttcaagctttaatccagtaccctgatgttcagaccgctgtggttgccaaggaa
gccttggagggacactgcatatatgatggagggttttgcaagcttcacatctcttattct
cgtcacactgatctaagtattaaggtgaacaatgatcggagtagagattacacaatgcca
gctgccccaatgatgaacgcacaaccatcaatcttggggcaacaaccaccatcggccgcc
ccacaatacaatgccgccaaccagtacatgccagccccccagccttctgcagggtgggtt
caaggtccttcggcagggcctcaatccatgccgatgcagcaaatgcataatcaccagtac
atgccacagcaggggggcatgccaccatctgaaatgggtcgtgggccgacccattttaat
ggtcaaaatggatacccacaaggtggagcaccgccacgttaccatcaatag
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