Helianthus annuus (common sunflower): 110872317
Help
Entry
110872317 CDS
T05101
Name
(RefSeq) elongation factor-like GTPase 1 isoform X3
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110872317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110872317
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
GTPases
110872317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EF-G_D2
EFG_III
SRPRB
EFG_IV
Myb_DNA-bind_4
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110872317
NCBI-ProteinID:
XP_021976792
LinkDB
All DBs
Position
8:20295059..20300712
Genome browser
AA seq
1011 aa
AA seq
DB search
MADSHDPKNIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGRLRFMDYLDEEQRRA
ITMKSSSIALQYKNHSINLIDSPGHMDFCSEVSTASRLSDGGLVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLIVELKLSPLEAYNRLLRIVHEVNGIVSAYKSEKYLSDVDS
ILARPVGETGDEYQELLDDDDEEDTFQPQKGNVVFVCALDGWGFGICEFAEFYASKLGAS
VAVLQKAFWGPRYFVPKTKRIVGKKGLPAGSKARPMFVQFVLEPLWQVYEAALDTNGDKT
ILEKLIKSFNLSVPPRELQNKDPKSVLQSVVSRWLPLSDAILSMVIKHMPDPGTAQAFRL
SRLLPKREILDDDVGKSDVIAEAELVRKSVEACDSRPEAPCVAFVSKMFAVPMKMLPQRD
VNGGIVNNIEVGNGDSDECFLAFARIFSGVIHLGQKVFVLSALYDPLKTGDSVQKHIQEA
ELHSLYLMMGQGLTPVASARAGNIVAIRGLGQHILKSATLSSTKNCWPFSSMTFQVSPTL
KVAIEPSDPVDMGALMKGLRLLNRADPFVEVSVSARGEHVLAAAGEVHLERCIKDLKERF
AKVNLEISPPLVSFRETIEGESLNSFDKFKSLTGNSNVIEKTTPNGRCTVRVHILKLPDA
LTKLLDESSDLLEDIIAGKAIRAQDDEHPVESLRKRIWDAVESEISDTNAEKDKEKLKLL
WENLLKRIWALGPRQIGPNMLLLPDSTTDDNGSSVLIKGSPYVSERLGFVSSSEESETET
TSAETRSLKEEADSLRSSVLSGFQVATGSGPLCDEPMWGLAFVIEASISPYDSESEAVNQ
SDQYGVFSGQVMTAVKEACKAGVLQKNPRIVEGMYFCELNTPTEYLGPMYAVLARRRARI
LKEEMQEGSPLFTVHAYVPVAESFGFPDELRRWTSGASSALLVLSHWEALPEDPFFVPKT
EEEKEEFGDGSSVLQNTARKLIDGVRRRKGLAVEEKVVQFATKQRTLARKV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcacacgaccccaaaaacatccgaaacatatgcattctcgcccacgttgac
cacggcaagaccaccctcgccgaccacctaatcgcctcctccggcggcggcgttctgcac
ccaaaacaagccggcaggctccgcttcatggactatctagacgaagaacaacggcgtgca
ataaccatgaaaagttcctcaattgctcttcaatacaaaaaccattcaatcaacctaatt
gattcaccgggtcatatggatttctgcagtgaagtttcaaccgcttcaagattgagtgat
gggggtttggtgttagtggatgctgttgagggtgttcatattcaaactcatgcggtttta
cgacaagcctggatcgaaaagcttacgccttgtttggttttgaataagattgataggttg
attgttgagttgaagttgagtcctttagaggcgtataatcggcttttacggattgttcat
gaggttaatgggatcgttagtgcgtataaatcggagaagtatttgtcggatgttgattcg
atacttgctcgcccggttggtgaaacaggggatgagtatcaagaactgttggatgatgat
gatgaggaggatacgtttcagccgcagaaggggaatgtggtgtttgtttgtgctttagac
gggtgggggtttgggatatgtgagtttgctgagttttacgcttcgaaacttggggcgagt
gttgcggttttgcagaaggcgttttggggtccgaggtattttgttccgaaaacgaaacgg
attgtgggtaagaaagggttgcctgcggggagtaaggcgcggcccatgtttgtgcagttt
gtgctcgagccgttgtggcaggtgtatgaggctgcgttggatacgaatggggataaaacg
attcttgagaagttgattaagtcgtttaatttgtcggttcctcctcgtgagcttcagaat
aaagatccaaaatctgttcttcaatctgttgtgagtaggtggcttcctttgtcggatgct
attttgtcgatggtgattaaacatatgccggatcctggtaccgcgcaagcgtttcgcttg
tcgcgtttgctgccgaaaagagagattcttgatgatgacgttggtaagtctgatgtgatt
gcagaggctgagcttgtgcgaaagtcagttgaggcgtgtgattcacggcctgaagctcca
tgtgtcgcttttgtatctaaaatgtttgcggttcccatgaaaatgctacctcaaagagac
gtaaacggtgggattgtgaacaatatagaagttggaaatggggattccgatgagtgtttt
cttgcatttgctaggatctttagtggtgttattcatttgggtcagaaggtatttgtgtta
tcagcattgtatgatccgcttaaaacgggtgattcggttcagaagcatattcaagaagct
gaattgcattctttgtatttgatgatgggtcaagggttaacacccgttgcttccgcacgg
gctggaaacattgtcgccattagagggttaggtcaacatattttgaaaagcgcgactctt
tcatcaacgaaaaactgttggccgttttcaagtatgacgtttcaagtttcaccgacgtta
aaagtggccattgagccgtctgacccggttgacatgggtgcgcttatgaaagggctccgg
ctgttaaaccgggctgacccgtttgtagaggtcagtgtgtccgctagaggcgaacacgtg
cttgctgctgcgggtgaagttcatttggaaagatgtattaaagatttaaaagagcggttt
gcgaaggtaaatttagaaatctcaccgcctcttgtgtcgtttagagaaacaatcgaagga
gaatcgttaaactcgtttgataaattcaaatcgttaaccgggaattcaaacgttattgaa
aaaactacaccaaacggaaggtgtaccgttcgtgtgcacatattgaaacttcctgatgca
cttacgaaattgctagatgaaagttcggatcttctagaggatattatcgcaggtaaagcg
ataagagctcaagacgatgaacacccggtagaatcgcttagaaaacgcatatgggatgcc
gttgaaagtgaaatttcagacacgaatgcggaaaaagataaagaaaagttaaaactttta
tgggaaaatcttctgaaacgaatatgggctttagggccacgacaaatcggtcccaacatg
cttcttcttccggattcaactacagacgacaacggttcatcggtccttattaaaggttct
ccatacgtatctgaacggttaggttttgtgtcgagcagtgaagagtcagaaaccgagaca
acaagcgctgaaacccgatcactgaaagaagaagccgatagcctcagaagcagtgtctta
tccgggttccaagtagccactggatccggcccgttatgcgacgaacccatgtggggttta
gcatttgtaatagaagcttcgatttcaccttacgatagcgagtcagaagccgtcaatcaa
agcgatcaatacggggtgttttccgggcaggttatgacagcggttaaagaagcatgtaaa
gccggcgtacttcaaaaaaaccctagaatcgttgaggggatgtatttctgtgaactaaac
acaccaaccgagtatttagggcctatgtacgctgtgctggcccgccgacgtgcccggatt
ttgaaagaagaaatgcaagaagggtcaccgttgttcacggtgcatgcttatgtaccggtt
gcagaaagtttcgggtttccagatgagttaagaagatggacttctggtgcttcgagcgct
cttcttgttcttagtcattgggaagcacttccggaagacccattttttgtaccgaaaaca
gaagaagaaaaagaggagtttggtgatgggtcgagtgttttacaaaatacagcaagaaaa
ttaatagacggggttagaaggcgcaagggtttggccgttgaggaaaaggtggtccagttt
gctacgaaacagaggactctggcccgtaaggtttaa
DBGET
integrated database retrieval system
