Helianthus annuus (common sunflower): 110872449 Help Entry 110872449         CDS       T05101                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism han  Helianthus annuus (common sunflower) Pathway han03040   Spliceosome Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110872449  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:han03019]     110872449    03041 Spliceosome [BR:han03041]     110872449 Messenger RNA biogenesis [BR:han03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      110872449 Spliceosome [BR:han03041]  Complex B   Other components    Prp19-related factors     110872449  Complex C     110872449 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 UTP6_C Dicty_REP Motif Other DBs NCBI-GeneID:  110872449 NCBI-ProteinID:  XP_021976942 LinkDB All DBs Position 1:complement(105273922..105277767) Genome browser AA seq 906 aa AA seqDB search MAISSELYPSQDDLLYEEELLRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY KLWLAYLRERLELVRNLPISHTHYQTLNNTFERALVTMHKMPRIWIMYLTSLTEQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQRGVPIETSLRVYRRYLKYDPGHIEDLIEFL LNSGLWQEAAERLAGVLNDDRFYSIKGKTKHRLWLELCDLLTQHATEISGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRKLLEKARDVFEEGMTTVVTVRDFSVIFDAYSQFEESVL ALKMEGMDESEEEEEENDSDEDEEDDRLNVAKLEHKLKRFWLCDEKDVDLRIARLENLMD RRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTIDPMKAVGKPHTLWV AFAKLYEAHNDIANARVIFDKAVQVNYKAVDNLASVWCEWAEMELRHKNFRGALELMRRA TAEPSVEVKRRVAADGNEPVQIKLHKSLRLWTFYVDLEESLGTLESTRAVYERILDLRIA TPQIIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERS RELFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPSEKLSMYEIYI ARAAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIRYAELEKSLGEIDRARKIYVYASWL ADPRWPDSDFWVKWHEFEVNHGNEDTFRDMLRIKRSVTARHSQTHVMLPESLMQKANGDE TAMDESKKAEDEMAALERKVAPDTAKNDTNAARFVHGGVQLSEKESGLIQNKEEIELPEG SGSDEEDDDDDGKVEIAQKDVPDAVFGGLIRKRDEEEEAQGKEAENGDGGSRLGALERIK RMRQGN NT seq 2721 nt NT seq  +upstreamnt  +downstreamnt atggcgatttcaagcgagttgtatccaagccaagacgacctcctctacgaagaagaactc ctcagaaatcccttcagtttgaagctatggtggcgatacttaattgcacgcaccgaatct ccgttcaagaagcgtgccgtgatctatgaacgagcgttgaaagctttaccaggaagctac aagttatggctcgcgtatctccgtgaacgcctcgaattggtacgtaatttgccaatatct catacgcattatcaaactttaaacaatacgtttgaacgagccctagttacaatgcataag atgcctaggatttggattatgtacttgactagtttgactgagcagaagctagttactaga actcgtaggacgtttgatagggcgctatgcgcgttgcctgttacgcagcatgataggatt tgggagccgtatttggtgtttgtgagtcaacgaggtgtgccgattgagacgtcacttagg gtttacaggaggtatttgaagtatgatcctggtcatattgaggatttgattgagtttttg ttgaattcggggctgtggcaggaggcggcggagaggttggctggggtgttgaatgatgat aggttttattcgattaaggggaagacgaaacataggttgtggttggagctttgtgatttg cttactcaacatgctacggagatttcggggttgaatgtggatgcgattattagaggtggg attaggaagtttacggatgaagtgggacggttgtggacttcgttggcggattattatatt agaaggaagttgttggagaaggctagagatgtgtttgaagaagggatgacgactgttgtt acggtgcgagattttagtgtgatttttgatgcttactcgcaatttgaggaaagtgttctt gctttgaaaatggaagggatggatgagagtgaagaggaagaggaagagaacgatagtgac gaagatgaagaagatgaccggcttaatgtggcaaagttagaacacaaacttaagcggttt tggttgtgtgatgaaaaggatgttgatttaaggatagcaaggttagagaatcttatggat agaagaccggaactagctaatagtgttcttcttcgccaaaatcctcataatgttgaacaa tggcataggcgagtgaaaatctttgaaggaaatccaacaaagcagatattaacatatacc gaggctgttagaacaatcgacccaatgaaagctgttggaaaacctcatactttatgggtt gcatttgctaaattgtatgaagctcataacgacattgctaatgcaagagtgatattcgat aaagctgtgcaagttaactataaagctgttgataaccttgctagtgtatggtgtgaatgg gcagaaatggaacttagacacaaaaattttaggggtgcactggagttaatgaggcgtgct acagctgaaccgtctgttgaggtgaaacgcagagtggctgctgatggcaatgaaccggta caaataaagttgcacaaatcattgagactgtggacattttacgttgatttagaggaaagt ttaggcactttggaatcaacccgtgcagtatatgagagaatattggatcttcgtattgcc acaccacaaattattataaactatgcaatgctgttagaggataataagtactttgaggat gctttcaaggtctatgaaagaggtgtgaaaatattcaaatatccccacgtgaaagacatt tgggttacatatctctcgaagtttgtcaaacgatacgggaaatccaagcttgaaagatcc cgagagctatttgagcatgctgttgaaatggcccctgctgaagttgtaaagccgttgtat ctgcaatatgctaaactagaagaggattacggtttagctaaacgagccatgagggtttat gatcaagcaacaaaagcggtcccaccaagtgaaaaactgagcatgtatgaaatttacata gcccgtgcagccgaaatttttggagttcctaaaactagggagatttatgagcaagcaatt gtgtctgacgggcttcctgaaaaggatgcaatgaagatgtgtataaggtacgctgagctg gaaaagagtttgggagaaattgaccgtgcgcggaaaatatacgtttatgcgtcttggtta gcagacccgcggtggcctgatagtgacttttgggttaagtggcacgaatttgaagtaaat catggtaacgaggatacgtttagagacatgcttcgtattaagagaagtgttactgccaga cacagccagacacatgtgatgctaccggagtctctaatgcagaaggctaacggtgatgaa accgccatggatgaatcaaagaaagctgaagatgaaatggctgctttagaaaggaaggta gcgcctgacactgctaagaacgacaccaacgccgctagatttgtacacggtggtgtacag ttgtcggaaaaggagtcgggattgattcaaaacaaggaagagattgaacttcctgaagga agtggaagtgatgaagaagacgatgacgatgatggcaaagttgaaatcgcacagaaagat gtaccggatgctgtgtttggagggcttataagaaaaagagacgaagaagaagaagcgcaa ggtaaagaggcggaaaatggtgacggtggaagccgccttggcgcgcttgaacgaattaaa cgcatgcgtcagggtaactag

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