Helianthus annuus (common sunflower): 110872558
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Entry
110872558 CDS
T05101
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110872558
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
110872558
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
TPR_GEMI5
Beta-prop_HPS5
WDR55
CFAP43_N
PhyR_sigma2
Motif
Other DBs
NCBI-GeneID:
110872558
NCBI-ProteinID:
XP_021977063
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Position
8:complement(33001151..33008281)
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AA seq
1285 aa
AA seq
DB search
MKNLKLSWELSSNLQLQSPNEVIRCTAFDIEQNRFFFASSDNLIYTLPISSSQNEESHGL
SSVIETVGLDAGDFITSMEYVMEKESLIIGTSSGDLLLYNVDDSAMEVVGRVEGGVKSIS
PSPDGDLLCIITGIGQMLVMTHDWDLLYETPLEEHIEDTDTRDQGLHLECTPGSPATWRG
DGKFFATITSTPNSSHKKLKVWERDTGNTHSVSEPKASMGEIAEWMPSGAKIATVCDNKI
VFFEKNGLERNSFTAIDGIDATIVNLKWNCNSDLLAAVVRTKTYNSIKIWFFSNNYWYLK
QEIRYSKHDGVRFMWDPVKPLSLISWTLEGIIKVYNFIWISAVTDNSVALVVDGSKILVT
PLSLSLIPPPMYLFQLRFPCSIRETAFWSKNSKNSLAVSLTDGSLSVVELPELDTWQDLE
GEVIHVELCITEDLSSFVHLTWLDSRVLLGVILDPTHTNSESPKYYIQELELGCSEDHIP
GSVTGSGFDANVVNKLPVESTVIGLVSNPVKKRSAFLQFNGGNIFEYETNFPLHERSNLR
FSSSCPWMSVGPIEDSDAFLLFGLDNNGKLHVNQTILCNNCSSFSLYSNNANQTITHLIL
ATKQDLLFVVEIRDIVLGQTEVKYGNFLPVVITRKNAEEGKKFIQIWEKGSKILGVVHGD
ESTVIIQTTRGNLESIYPRKLVLESIVNALVQGRFRDSLLMVRRHRIDFNIIVDHRGWQE
FVKSATEFVKQVDNLSYITEFVCSLKNENIMETLYKGYISYTNEENGTLGGQSKVNSVLL
AVRKALEEQIVEGPARELCILTTLARSDPPYLEEALERVKVTREMELLDCDGLERKRVPS
SEESLKHLLWLSESEAVFEAALGLYDLNLAAIVALNSQQDPKEFLPFLQELEILPVHIMR
YKIDLKLRRFEKALQHIVAAGDTYFEDCINLVKNNPQLFSRALQLITDPTKKKQVLEAWG
DQLTNTKCLEDAATIYLCCNNLEKALKSYRSSNNWGGVLTVAGLMKLPKEEITQMAYELC
EELQTIGKPSEAAKIAFDYCNDVKNGISLLISAREWEEALRIGLMHGVEELISDVKVGAV
ECGTGLIAEYEEGLEKIGKYLARYLAVRQRRLLLAAKLRADERSINDLDDDAVSEASSSF
SGMSAYTTGSRKGSAASMSSSATSKRGIRRQKKKGKIRAGSPDEEMALVDHMKGMSLTAG
AKRELKSLLGCLVMIGKEDMAQKLQRVGESFQLSQISAVKLAEDAVASDVVDEHTFVLEV
YMKKLRKELLQSEEFFWQSKVFVAP
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgaaactctcatgggagctctcatctaacctccaattacagtcaccaaac
gaagtcattcgttgcaccgctttcgacatcgaacagaatcgcttcttcttcgcttcttcc
gataacctcatctacactcttcctatttcttcatctcaaaatgaagaatcgcatggatta
agttctgtgattgagactgttggtttagatgctggtgattttattacttctatggagtat
gtaatggagaaagaatcacttattattggaacttcaagtggcgatctgttactttataat
gtggatgatagtgcaatggaggttgttggcagagtggaaggtggcgtcaagtctatttca
ccgagcccggatggagatttgctttgtattataaccggtataggccaaatgttggtgatg
actcatgattgggacttgttgtatgagacgccacttgaagagcacattgaagatactgac
acacgtgatcaaggcctgcacttggaatgtacacctggaagtcccgctacctggcgaggt
gacgggaaattctttgctacaataacctcgacgccaaattcttcgcataaaaagcttaaa
gtctgggaacgagacacgggtaacacacattcagtttccgaacccaaggcttctatggga
gaaatcgctgaatggatgccatctggcgcaaaaatcgccactgtttgcgataacaaaata
gtttttttcgagaaaaacgggttagaacggaactcgtttactgcgattgacggaattgat
gcaactatcgtgaatctaaaatggaactgtaattcagatttgcttgcagccgttgttaga
acaaaaacttacaactcgattaagatatggtttttcagcaataactactggtatttaaaa
caagaaatcaggtactcaaaacacgatggagtgagattcatgtgggatccagtaaagcct
ctaagtttaataagttggacacttgaaggcataatcaaagtttataacttcatctggatt
tcagcagttaccgataattcagttgcattagttgttgatggttcaaagattttagtaacc
ccactttctttatccctaatcccgcctccaatgtatcttttccagcttcggtttccgtgt
tccattagagaaacggctttttggtccaagaattctaagaacagcttggcggtatctttg
acagatggcagtttgtctgttgtggagcttcctgaacttgacacgtggcaagatctggaa
ggtgaagtaattcatgttgagttgtgtatcactgaagatctttcgtctttcgttcatctc
acgtggctcgactcgcgcgtgcttcttggtgttattttagatcccacacataccaatagt
gagtctccaaagtactatattcaggaacttgaacttggatgctctgaggatcatattcca
ggctcagtaacaggctctggatttgatgcaaatgtcgttaacaagcttcctgttgagagc
acggtgatcgggctcgtttctaatccggttaagaaacggtcagcttttcttcagtttaac
ggtgggaatatcttcgagtacgaaacaaatttcccccttcatgagcgcagcaatttgcgc
ttttcatcttcttgcccgtggatgagtgtggggcccattgaagattccgacgcatttcta
ttgttcgggctcgataacaatggtaagctgcatgtgaatcagactattttatgcaacaat
tgtagcagcttctcgttgtactcgaataacgctaatcagacaataacacatctaattctt
gcaactaagcaagatttgttatttgtcgttgagattcgcgacattgtgcttggtcaaact
gaggtcaaatacggcaactttttaccagttgtaataaccagaaaaaacgcagaagaagga
aagaagtttatacaaatatgggagaaaggttccaaaatcttgggagttgtgcatggagat
gaatctactgttattatacaaacaacgcgtggaaatttagaaagcatttatccgagaaaa
ttggtgctagaatcgatcgttaatgctttggttcaagggcgttttcgggattccttactt
atggtaagacgacacaggattgattttaatatcatcgttgatcacaggggctggcaagag
tttgttaaatcagctacagagtttgtaaaacaggtggataatcttagctacattaccgaa
ttcgtttgttctttaaagaacgaaaatatcatggagactttgtataaagggtatatatct
tatacaaatgaggaaaacggtacacttggtggtcaaagtaaggtcaactctgtcttactg
gctgtgaggaaagctcttgaggagcaaatagtggaaggtccagctagagagctttgtatt
ttaaccactttggcccgaagtgacccgccgtatcttgaagaagctttggagcgcgttaaa
gttacccgtgagatggagttattggactgtgatggcctggagagaaagcgggtcccgtcc
tctgaggaatctttaaaacatttgttgtggctttcggaaagtgaggctgtttttgaagct
gctttgggcctttatgacttgaatcttgcggctatagttgcgttgaactcacaacaggac
ccgaaggagttcttaccgttccttcaggagcttgaaatcttgccagttcatataatgagg
tataaaattgacctcaagctaaggagattcgaaaaagcactccaacacatcgttgctgca
ggcgacacttatttcgaagactgtatcaatctcgttaaaaacaacccacaacttttctct
cgcgcacttcaactgataaccgaccccactaaaaagaaacaagttcttgaagcatgggga
gaccagttaaccaataccaaatgccttgaagatgccgctacaatatatttatgctgcaac
aatctagaaaaagcgttaaaatcttatcgatcttctaacaactggggcggtgtacttacc
gttgctggtctcatgaaattaccgaaagaagagattacacaaatggcgtatgagctttgt
gaagagcttcaaacgatcgggaaaccaagtgaagctgccaaaatcgcttttgattattgt
aatgatgttaaaaacgggattagtcttttgattagcgcacgggaatgggaagaagcgttg
agaatcggtttaatgcatggggttgaggagttgatttccgatgtgaaagttggtgcggtt
gagtgtgggaccggtttgatagcggaatacgaagaggggttggagaaaattggaaagtat
ttagcgcggtatttggcggttcggcagcggcggttattgcttgcggctaagcttcgggcc
gatgagagatcgataaatgatctcgatgatgatgcggtttcggaagctagcagtagtttt
agtggaatgagtgcttacaccactggatcaagaaaaggttcagcagcttccatgagttca
agtgccactagcaaacgaggaataaggcggcaaaagaaaaaagggaaaattcgtgctggc
agcccggatgaggaaatggcactagtagatcatatgaaggggatgagcttaacagctgga
gcaaaacgtgagcttaaatctttgttgggttgtcttgtgatgatcgggaaggaagatatg
gcgcaaaaattgcaacgagttggagaaagttttcagttatctcaaatatcggcagtgaag
ttagcagaagatgcagtggcaagcgatgttgtagacgaacatacattcgttttggaggtt
tacatgaagaaattaaggaaagagttgttgcagtctgaggagttcttttggcagtccaag
gtttttgttgctccttag
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