Helianthus annuus (common sunflower): 110872668
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Entry
110872668 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110872668
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110872668
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110872668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-Nse
zf-C3H2C3
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110872668
NCBI-ProteinID:
XP_021977211
LinkDB
All DBs
Position
8:42524968..42529102
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AA seq
456 aa
AA seq
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METTGVSVDTTTSDASVSNNNNNSIPPSSNPLSPRITSSTISPRRTTSSSESFPVIRFLQ
APVTTVLEYSGVLRPRSNPEYHESESLIHDHHDHDHGSGDLGTGVGSSGDGDSGEVSIRI
IGEEGRGEAVAVNGGDGGTGEREMADSSDVDGSGSRGDSSSQQRYDMQQVSRWIEQILPF
SLLLLIVFIRQHLQGFFVTIYVTAFMYKSNDILQKQTALKGERKLSVLGGYFVVFVLHVI
GVYWWYQNDDLCYPLFMVPPRAIPPFWHAIFTIIVNDTMVRQAAMAIKLVLLMYYRNGKG
HNFRRQGQMLTLVEYALLLYRAFLPAPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVE
KVGSVWTALKALSRKEVHYGSYATPEQVIEAGDLCAICQEKMQAPVLLRCKHIFCEDCVS
EWFERERTCPLCRSVVKPAELRSFGDGSTSLFFQLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccggtgtgagcgttgacacaaccacttctgatgcatctgtaagtaataat
aataataatagtatcccaccttcgtcaaaccctttatctccaagaatcacaagcagtaca
atttctccaagaagaacgacgtcgtcgtctgaatctttccctgttattagattccttcaa
gctccggtcaccactgtgttggaatattccggtgtgcttcgaccgcggtcgaatcccgaa
taccatgaatctgaaagtttgattcatgatcaccatgatcatgatcacggtagtggtgat
ttaggtacaggtgtaggtagtagtggggatggggatagtggggaggtttcgattcggata
attggggaggaagggcgcggtgaggcggtggcggtgaatgggggagatggtggtacaggg
gagagggaaatggctgattctagtgatgtggatgggagtgggagtcggggtgattcgtcg
tcgcaacagcggtatgatatgcagcaggtttcgaggtggatcgagcagattcttccgttt
tcgttgctgttgttgatcgtgtttattcggcagcatttgcaaggtttctttgtcacaata
tatgtaactgcttttatgtacaagtctaatgatattcttcaaaagcagacagctttaaag
ggggagagaaaactttccgttcttggtggttattttgtagtttttgttcttcatgtgatt
ggagtttactggtggtaccaaaatgacgatctttgttatccgctgttcatggttccacca
agagcaataccaccgttctggcacgctatatttaccatcatcgtgaacgatacaatggtg
cgacaagcagcaatggcgattaagctggtattgcttatgtattacagaaatggcaagggt
cataattttcgtagacagggtcaaatgctaacccttgtagaatacgcattgctgttatac
cgtgcattcttacccgctccagtttggtaccggtttttcctaaacaaagaatacgggagc
cttttttcatctttgaccacagggttgtatttgactttcaagcttacatcgattgttgag
aaggttggatccgtgtggactgcattgaaggcgttatcacgtaaggaagtccattatgga
tcgtatgcaacaccagaacaggtaattgaagcaggggacttgtgtgctatttgccaggaa
aagatgcaagctccggttttgttgcgctgcaaacacattttctgtgaagattgtgtttcg
gaatggtttgaaagagaaaggacgtgcccgttatgcagatctgtggtgaagccagcagag
ttacgttcattcggtgatggatccacaagcctcttcttccagttgttctag
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