Helianthus annuus (common sunflower): 110872670
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Entry
110872670 CDS
T05101
Name
(RefSeq) uncharacterized protein LOC110872670 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110872670
Membrane trafficking [BR:
han04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110872670
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110872670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
110872670
NCBI-ProteinID:
XP_021977212
LinkDB
All DBs
Position
8:complement(39580737..39593824)
Genome browser
AA seq
1111 aa
AA seq
DB search
MFAKLFHRAPQESSPRKDAPQLKDFEPHVVVHYGIPSTASILAFDPLQHLLAIGTLDGRI
KLIGGDNIECLLISPNPVPLKSLEFLQNQGYLVSVSNENVVQVWDLEQRRLASNLQWGSN
ISAFSVVCGTNYMYLGDEYGYLSVLKFDFEEGNIQHMPYQIPAELIADEAGIPVPDQPSI
VGLLAQPCSSGKRVLIAYQIGVIILWDISEDKAILVRGHNDLQLKDEITIHSTTDIRHDK
VNNTLNEEQIEKEISALCWVSSDGSMLAVGYVDGDIILWNLPTAVSANNQKGNKASNNAV
KLKLSSGDRRLPVIVLHWSNSPLSGSAGQLFVYGGDDIGSEEVLTILNLEFSSGLEALKC
VKRLDLTLNGSYADIELVRAPESSDTTLFVLTNPGQLHVYNDECLTGLISAPDMKHAVNA
VQCPVTIPTVEPYMTVSKLCLVDYNDGLQRVLKEIVLAAKPQSSSPTSPGNAKWPVSGGF
PSQLSSAENIGVERIYIAGYQDGYVRIWDATFPVFSLIFVLGLQQSLELNLFPQVEGTEI
SGASEPVSALDFNSTTSSLAVGNDCGLVHLFKLVGESEKLNTHLVTETKRDEINLHHGKG
WHLTAVFSLIKSPVRSLQYAFSGARIIVGHECGKAAVLDVISSSVLFLTDCLVSNGSPIV
SITVKTYSQTDTDDPKQSGDTSSKDTEKEVAFILTKDAQVILVDINSGDKICCQSVSPKE
STAISIYLLDEKFAVPELSERNPVNSTHGPTDAESDSTVDEVSTSSEATEFWKTFVDSLI
LVCCGDSVLLHSTKSLIQGRSNFIRKIDLEKQCCWATIFKRNELESGVILVYSDGVVEIR
SLPDLIVLAETSIMSILRWNFKTNMEKTMSSFGNSNITMVYGCEYAVISLFTSENDFRIP
EALPRLHDKVVAEAAEAALKFSLSQKNKQVAPTGILGGIIKGIKREKENENTNVEETRDV
LVPKLEALFSRSPFSVADLDLDLDLGDDFDAPVKLVVEKIEVEPKSPEPPTPSQSQTKTE
KNKQKEREQLFEGGSEPKTRTADEIKAKYRKTGTGDTAAVALEAKDKLLERQMKLEKLKE
NSEELASGSENFASLAGELVKQMENRKWWQL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaattatttcacagagctccacaggaatcttctcctcgtaaggatgctcca
caattgaaagacttcgaaccacacgttgttgttcattatgggatcccatctactgcatca
atcctggcctttgatccccttcagcatctactggctataggcacactcgatggtcggatt
aagttgatcggtggtgataatattgaatgccttctaatatctccaaacccagtacccttg
aaatctctagagttcttgcaaaaccaaggttatctagtcagcgtctcaaatgaaaatgta
gtgcaggtgtgggatctagaacagaggcgattggcttctaatttacaatggggatcaaat
ataagtgcattctctgtagtttgtggtactaattacatgtatctaggagacgagtatggc
tatctgtctgtattaaagtttgactttgaagaagggaacatccaacacatgccttatcag
attcctgctgaactcatagctgatgaagctgggattccagtacccgatcaaccgtctatt
gtgggcctacttgcccagccttgttcctcaggaaaaagagtgctgattgcatatcaaatc
ggagtgataattttatgggatatttctgaagataaggctatacttgttagaggccataat
gatctccaactaaaagatgaaataactattcattctacaaccgatatcaggcacgataaa
gtaaacaatacattaaatgaagagcagatagagaaagagattagtgctctttgttgggtt
tcttccgatgggtcaatgcttgctgttggttatgtagacggagatattatattatggaat
ttaccaaccgcagtatctgccaataatcagaaaggaaataaggcgtctaataatgctgtt
aagttaaaattatcttcaggtgaccgtagactcccagtcatcgttctccattggtcaaat
agtccacttagtggttctgcaggtcaactttttgtgtatggaggtgatgatattggatct
gaggaagtcctaacgatcttgaatcttgaattttcatctggactggaagccctgaagtgt
gttaagcgcttagatcttacacttaatggctcttatgcggatatagaattggtacgcgcg
cctgagagtagtgataccacgctttttgtgctgaccaatccaggtcaactgcatgtctat
aatgacgagtgcttgactggattaatatctgctccagacatgaaacatgctgtaaatgca
gttcagtgtcctgtaactataccaacagttgaaccttatatgaccgtctcaaagctctgt
ttggtggactacaatgatggtttgcaaagagttctcaaggagatagtgttggctgcaaaa
cctcaatcatcatctcctacatccccaggaaatgcaaagtggcccgtgagtggtggcttt
ccgagtcaactatcgtcagccgaaaatattggagttgagagaatatatattgcagggtat
caagacggctatgtccgaatatgggatgccacatttcccgttttctcacttattttcgtt
ctaggattgcagcaatcattggagcttaacctatttccccaggtggaaggtaccgaaatt
tctggtgcaagcgaacccgtatcagcgttggattttaattctacaacgtcaagtttggct
gtcggcaatgattgtggtctggttcatctatttaagctagttggagaatctgaaaagtta
aacacacaccttgtgacagaaaccaaacgtgacgaaattaatttgcaccatgggaaaggg
tggcatttgacagctgtcttttctcttataaaatctcctgtacgaagcctacaatacgca
ttttctggagctagaataatcgttggacatgaatgtggtaaggctgctgtactcgatgtt
atatcgtcatcagtactgtttcttacagattgcttagtcagcaatggctctccaatcgtt
tctataaccgtaaaaacgtattcacaaactgatactgatgatcctaagcaatctggagac
acatcatcaaaagatacagagaaggaagtggctttcatattgactaaagatgcacaagtc
atccttgtggatattaatagtggtgacaagatctgctgtcagtctgtaagccctaaggaa
tcaactgcaatctcaatatacctgttagatgaaaagtttgctgttccagagttgtcggaa
cggaatcctgtgaactcgacacatggcccgacagatgcagaaagtgattcaactgtagat
gaagtaagtacctcaagtgaagcaactgaattttggaagacgtttgttgactcactcatt
ttagtttgttgtggggattcagtacttctacattcaaccaagtctctaatacaggggcgg
tcaaacttcatcagaaaaattgatttagagaaacaatgttgctgggctacaatcttcaag
agaaatgaactagagtctggagtgattttagtatattctgacggagttgttgagatcagg
tcattgccagatcttattgtgctggcagaaacttccataatgtctattctcagatggaat
ttcaagaccaatatggagaagacaatgagttctttcggtaattcaaatataacaatggtg
tatggatgtgaatatgctgtaatatctcttttcacctctgaaaatgacttcaggatcccg
gaggctttacctcgtcttcatgataaagttgttgctgaagctgcagaggctgctcttaaa
ttctctcttagccagaagaataaacaggttgcacccacaggaatacttggtggtatcatc
aagggcataaaaagagagaaggaaaatgagaatacaaatgttgaagaaactcgagatgtt
cttgttcctaagctagaagccttgttttcaaggtccccgttttcagtagcagatttagat
ttggatttggatttgggagatgatttcgatgcacccgtcaaattagttgtagaaaaaatt
gaggtcgaacctaagtctccggagccaccaaccccgagtcagagtcagacgaagacagag
aaaaacaaacaaaaggagagggagcaattatttgaagggggttcagaaccaaaaactagg
acggcagatgaaatcaaggccaaatacagaaagacggggaccggggatactgcggctgta
gctctggaagcaaaagacaagcttctcgagcgccaaatgaaacttgagaaactaaaagaa
aactcagaagaactagcaagcgggtccgagaactttgcatcattggcaggtgaactggta
aagcaaatggagaatcgaaaatggtggcaactatga
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integrated database retrieval system
