Helianthus annuus (common sunflower): 110873514
Help
Entry
110873514 CDS
T05101
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110873514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110873514
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110873514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110873514
NCBI-ProteinID:
XP_021978144
LinkDB
All DBs
Position
8:complement(100873209..100879200)
Genome browser
AA seq
359 aa
AA seq
DB search
MKGGELEVCFERLMMVGGGRVNIISDWNEIPMELLLRIVSLLDDRTVIVASAVCCGWRDA
ICLGVTHLSLSWCKNNMNNMVLSLAPKFKNLRGLILRQDKPQLLDNAVEVIANNCHDLED
LDLSKSFKLSDRSLYALAHGCQNLIKLNISGCSSFSDNALAYLTSYCKKLKILNLCGCVK
AASDKALKAIGYNCSQLQSLVLGWCEEVGDDGVTSLAHGCHDLRALDLCGCVLITDESVI
ALANNCPHLRSLGLYYCQNITDQAIYALAHSRATNKHQAWGSVRTRDEEGSGLMNLNISQ
CTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCACAFQAHRVDHTLPHHAY
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggtgaactagaggtgtgttttgagaggttgatgatggtgggaggtggtagg
gttaatattattagtgattggaatgagattccaatggagcttttgttgaggattgtgtct
ttgttggatgatcggacggtcatagttgcttctgctgtttgttgtggatggagagatgct
atttgtttgggagttactcatctttcattgtcttggtgcaaaaacaacatgaacaatatg
gtcctttctcttgctcccaagttcaaaaacttaaggggtttgatccttcggcaagataaa
ccacaattacttgataatgcagttgaagtgattgcaaataattgccatgatttagaggac
cttgacctcagcaagagcttcaaacttagtgatcgatctttatatgctttggcacatggt
tgtcaaaatcttattaagctcaacattagcggttgttcttcgtttagcgacaacgcactt
gcatatttgactagttattgcaaaaagttgaaaatcttgaatctttgtggatgtgttaaa
gctgcatccgacaaggccttgaaggcgatcggatacaactgcagtcaacttcaatcactg
gtcctaggatggtgcgaggaagttggtgatgacggagtaacaagcttagcacatggctgt
catgatcttcgtgcactcgacttgtgtggatgtgttcttataacagatgaaagtgtgata
gccttagcaaacaactgcccacacctgagatctctgggtctctattactgtcaaaacatc
acggaccaagccatatacgcattggctcacagtcgagcaacaaacaagcaccaagcctgg
ggttcagtgagaaccagggatgaagaagggtctgggctcatgaaccttaacatcagtcaa
tgcaccgccctaacaccgccagcggttcaggcattatgtgattcatttccagcacttcat
acttgcccaggtagacattcactgattataagtggttgcttgaatctaacttctgttcat
tgtgcatgtgctttccaagcacatcgtgttgaccacacgcttcctcatcatgcttattaa
DBGET
integrated database retrieval system