Helianthus annuus (common sunflower): 110874079
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Entry
110874079 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110874079
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110874079
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110874079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
Cadherin_C_2
zf-RING-like
Prok-RING_1
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110874079
NCBI-ProteinID:
XP_021978691
LinkDB
All DBs
Position
9:8138238..8139482
Genome browser
AA seq
366 aa
AA seq
DB search
MSFPTTHPPEFIGIPAKPQKTLTFIITFLIITPNSTLSQSSFSSANDENYSSSSINKFEP
SLAIVVGVLSIVFSLTFLTIIYIKCCHMSSSSSTHRLNQENFGNLPRTRSRFSGIDKTVI
ESLPYFKFSALKGWKNGLECSVCLSAFEDIELLRLLPKCKHAFHIDCIDQWLENHSSCPL
CRVKVVKDDIALSALSNSLRFNESEPSSLGLFIEREGSSRFGTNVENDQDQVILHKFNHR
IMISNENDPVTLKTRWSNVSSSDILFLKSEMITCVASSRFDHQLCPEIEGNNGHNRRVEE
PRRSVSEITVHPRFLEGEVRVDEKRLRRLWLPIARRTVERFANKENNNIPDGQRLEIEKS
REQLDV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagctttccgacgacccacccgccggagttcatcggaattccagcgaagccacaaaaa
acactcactttcatcatcacttttctcatcatcaccccaaattcaacactttcacaatcc
tcattttcttctgcaaatgatgaaaactattcatctagttccatcaataagtttgaaccg
agtcttgctatcgtcgtcggagtactctccattgtgttttcgctaacatttttaaccatt
atttacataaaatgttgtcacatgtcatcttctagttctactcatcgtctaaaccaagaa
aactttggtaatcttcctagaacaagatcaagattctcgggtatcgacaaaactgttatt
gaatcacttccttatttcaagttttcggcgttgaaaggatggaaaaatgggctggaatgt
tcggtttgtttgtccgcttttgaagacattgaacttcttcgacttctaccaaaatgcaag
catgcttttcacatcgattgtatcgatcagtggcttgaaaaccactcgagttgtccgctt
tgtagggttaaagttgtgaaggatgatattgcgctttccgcgctttcaaattctttaagg
tttaacgaatccgaaccctctagtctcgggctttttatagaacgagaggggtcatcaaga
ttcggtacaaatgttgaaaatgatcaagatcaggtgatcttgcataaatttaatcatcgg
atcatgatcagtaatgaaaatgatccggtgacgttgaaaaccagatggagcaatgtgagc
tcatctgatattctttttctaaaatccgagatgattacttgcgtggcaagtagccgattt
gatcatcagttgtgtccggaaattgaggggaacaacggtcacaaccggagagtcgaagaa
cctcgaagatcggtatccgagattacagttcatccaagatttcttgaaggtgaagttagg
gttgatgaaaaaagattaaggagattatggctaccaattgctagaagaacagttgaaagg
tttgctaataaggaaaacaataatattcctgatggtcaacgattagaaattgaaaagtca
agagaacaattagatgtatag
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