Helianthus annuus (common sunflower): 110875354
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Entry
110875354 CDS
T05101
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110875354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110875354
03110 Chaperones and folding catalysts [BR:
han03110
]
110875354
03029 Mitochondrial biogenesis [BR:
han03029
]
110875354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110875354
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110875354
Messenger RNA biogenesis [BR:
han03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110875354
Chaperones and folding catalysts [BR:
han03110
]
Heat shock proteins
HSP60 / Chaperonin
110875354
Mitochondrial biogenesis [BR:
han03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110875354
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110875354
Exosomal proteins of other body fluids (saliva and urine)
110875354
Exosomal proteins of breast cancer cells
110875354
Exosomal proteins of colorectal cancer cells
110875354
Exosomal proteins of bladder cancer cells
110875354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110875354
NCBI-ProteinID:
XP_021979246
LinkDB
All DBs
Position
1:complement(121164601..121168411)
Genome browser
AA seq
588 aa
AA seq
DB search
MASANAISTPSILSSHKKASVIDASKRTLQFQPGQKMRRSNRRFAVRAAAKDIEFDQRSR
AAMQAGIDKLADCVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDPMENAGAALI
REVASRTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVAGLIEELEKK
ARPVKGREDIKAIASISAGNDDIIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGME
IDRGYISPQFVTNPEKLLVEFENARVLITDQKISSIKDIISILEQTTQLRAPLLIVAEDI
TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGSEYLASDMGLLVQNATV
DQLGTARKITITKDSTTIIADAATKDEIQSRIAQIKKELFETDSVYDTEKLAERIAKLSG
GIAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTLVPAIKETIE
DADERLGADIIQKALVAPASLIAQNAGVEGEVVVEKVKESEWEMGYNAMTDKYENLVESG
VIDPAKVTRCGLQNAASVAGMVLTTQAIVVEKPKPRAPRAAEPQGLTV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcaaacgcaatctccacaccttcaatcctctcttcacacaagaaagcgagt
gttattgatgctagcaagagaactcttcagtttcagcctggtcagaagatgagacggtcc
aaccggcggtttgcggttcgagctgcggctaaagatattgaatttgatcagcggtccaga
gctgccatgcaggctgggattgataagcttgctgattgtgttggacttactcttggccct
agagggaggaatgttgtgttggatgaatatggttccccaaaggtggttaatgatggagtt
acaattgcaagagcgattgaactacctgaccctatggaaaatgctggtgcagctcttatc
agagaggtggcaagcagaaccaacgactcagccggtgacggtacaaccacagcatcggtt
cttgcccgtgaaattattaaacttggtctcctgagtgtcacgtctggtgctaacccggtg
tcattgaagaaaggtattgataagactgtagcgggtctaatcgaagaactggagaaaaaa
gcacgacccgtgaaaggccgtgaagatattaaagctattgcttcaatctctgctggaaac
gatgatatcattggaaccatgattgctgacgctattgacaaagttggaccagacggtgtc
ttgtctatcgagtcatcgtcctcttttgagacaacggttgatgttgaagaaggaatggag
attgatagaggatacatctccccgcaatttgttaccaaccctgagaaactactagttgaa
ttcgagaatgctagggttcttattaccgaccagaagatatcttcaataaaggatataatt
tcaatattggaacaaaccactcagttaagagctcctttgttgattgttgccgaagatatt
accggtgaggctctggctacacttgtcgtgaacaaacttcgcggtattctcaacgttgcc
gctattaaagcacctggttttggtgagagaaggaaggctttgctacaagatattgccatc
gtcacaggatccgagtatctagcaagtgatatgggtctgctagttcaaaacgccaccgtg
gatcaactcggtaccgctaggaagatcacaatcaccaaggactcaacaaccatcattgcc
gacgcagcaacaaaggacgagattcaatctcgaatcgcccagatcaaaaaggaattattt
gagaccgactctgtttacgacactgagaaactagcggaaagaatcgcaaagctatcaggt
ggaattgctgttattaaagtcggtgccgcaaccgaaaccgaattagaagaccgaaagcta
cgtattgaagatgctaaaaatgcaacttttgctgctattgaagaaggtatagttcctggt
ggtggtgctgcgtttgttcatctatcgacattggttccagccattaaagaaacgatcgag
gacgcagatgaacggttaggtgcagacatcattcaaaaggcgttggtggcaccggcatct
ttaatagctcagaatgcgggagttgaaggtgaagtggtggtggagaaagtaaaggagagt
gaatgggagatgggttacaatgcgatgacagataagtatgagaatttggtggagtctggg
gtgattgatccagcaaaggtgacgagatgtggtctgcaaaatgcggcttcggttgcgggt
atggttctgaccacacaggctattgtggttgagaagcctaagcctagggcaccgagggct
gctgaaccacaaggtcttactgtatga
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