Helianthus annuus (common sunflower): 110875688 Help Entry 110875688         CDS       T05101                                  Name (RefSeq) DNA ligase 1 isoform X2   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism han  Helianthus annuus (common sunflower) Pathway han03030   DNA replication han03410   Base excision repair han03420   Nucleotide excision repair han03430   Mismatch repair Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     110875688    03410 Base excision repair     110875688    03420 Nucleotide excision repair     110875688    03430 Mismatch repair     110875688  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:han03032]     110875688    03400 DNA repair and recombination proteins [BR:han03400]     110875688 Enzymes [BR:han01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      110875688     6.5.1.6  DNA ligase (ATP or NAD+)      110875688     6.5.1.7  DNA ligase (ATP, ADP or GTP)      110875688 DNA replication proteins [BR:han03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     110875688  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      110875688 DNA repair and recombination proteins [BR:han03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      110875688    NER (nucleotide excision repair)     Other NER factors      110875688    MMR (mismatch excision repair)     Other MMR factors      110875688 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  110875688 NCBI-ProteinID:  XP_021979586 LinkDB All DBs Position 1:119014034..119019411 Genome browser AA seq 796 aa AA seqDB search MLPLRSCCFTATHTTTTITTVLCNPIKHHLLKLKQLSYSKMSSSRPSAFDALMCNSRAAA SKNKTPSSSSSSSFSPKKRKTLISKSPINPTPVTELKHSEDEIHESNFKKVDKNQVKDEI NESNGTNEKNPNPNFVQLEEQKVLKKVKLVNVDESVVELKKKPGEFDPEKAGYWGAGERV PFMFVVKVFDEISRVSGRIMITEMVCNMLRTVVRTTPDDLVAVVYLLANRIAPAHEGLEL GIGDASLIKALAEACGATEAHIKKQYKELGDLGLVAKASRLSQPLMRKPQPLTVAKVFDT FRVIAKESGKDSQDKKKNHIKGLLVAATDCEPQYLIRLLQTKLRIGLAEQTLLTALGHAI FYTEKHPSPPARTNSPLEDAAKIVKQVYSVIPVYDKIVPALLSGGVWDLPETCCFSPGIP VGPMLAKPTKGVSEILDKFQNMEFTCEYKYDGERAQIHYLEDGTVQIYSRNAERNTEKFP DVVVAASRVKKPNVTSYVLDCELVAYDRKKQKILPFQILSTRARKNVVMSEIKVDVCIYA FDLLYLNGKQLLHEQLSTRRERLYESFEEECGYFQLATAITSNDLEEIQAFLDTAVNASC EGLIIKTLTQDATYAPAKRSNNWLKLKKDYMDTIGDSLDLVPIAAFHGRGKRVGGYGAFL LACYDINKDEYQTICKIGTGFSEAMLEERSKSLSLKVIPKPKQSYYRYSDTINPDVWFEA SEVWEVKAADLTISPVYCAALGAVDPNKGISLRFPRLLRVREDKGPEEASSSEMVADMYN AQKHTQNNNQNDNEDE NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt atgttaccgctccggtcatgttgtttcaccgccactcacaccaccaccaccataaccacc gtactctgtaaccctatcaaacatcatcttcttaaacttaaacaactatcatactccaaa atgtcatcatcacgcccctctgcgttcgacgcactcatgtgcaactcacgtgccgccgcg tccaagaacaaaacgccgtcgtcttcatcttcttcttcattttcccccaaaaaacgcaaa accctaatttcaaaatccccaattaatcccactccagttaccgaattaaagcactcagaa gatgaaattcatgaatcaaacttcaaaaaagttgataaaaaccaagttaaagatgaaatt aatgaatcaaatgggacgaatgaaaaaaatccaaaccctaattttgttcaattggaggaa caaaaggttttgaagaaagtaaaactggttaatgtggatgagagtgttgttgaattgaag aagaaaccgggtgaattcgacccggagaaagccgggtactggggggcgggtgagcgggtg ccgtttatgtttgtagtcaaggtgttcgatgaaatttcgagggtgtcgggtcggattatg attactgaaatggtgtgtaacatgttgaggactgtggttaggaccacaccagatgatttg gttgcggtcgtataccttttagcgaatagaatcgcgccggctcatgaggggctggagctc gggattggggatgcttctcttattaaggcacttgcggaagcgtgtggtgcgactgaagca catattaaaaagcaatataaggagcttggagacttgggtcttgttgctaaagcgagccgg ttgtctcaacctttgatgcggaaaccgcaaccgttgactgtggctaaagtttttgatacg tttcgggttattgccaaggaatctggaaaggatagtcaagataagaagaagaatcacatc aagggacttcttgttgcagcaaccgactgcgaaccccaatatttaatccgtctgcttcag acaaaattgagaatcggtttagcagagcaaactctcttgacagccctgggtcacgccatt ttctatactgaaaaacacccatcaccaccagctcgcaccaattcacctctagaagacgct gctaagattgttaaacaagtgtattcggtaattccggtatatgacaaaattgtccctgct cttctttctgggggtgtttgggatttgcccgaaacgtgttgtttttcacctggtattccg gttggacctatgctagctaagcctactaaaggtgtatctgagattttagataaatttcag aatatggagttcacttgtgaatataaatatgacggtgaacgggcccagatacattattta gaggatggcacggttcaaatatacagcagaaatgctgaaagaaacactgagaagtttccg gatgttgttgttgctgcttcaagagttaaaaaaccaaatgtaacatcatatgttctggac tgtgaactggttgcatacgatcgcaagaagcagaaaattctaccatttcagattttaagt acgcgtgctcgcaaaaatgttgtgatgagtgaaattaaggttgatgtatgcatatatgca tttgatttgttgtatctgaatggaaagcagctgttgcacgaacaacttagtactcgtaga gagcggttatatgaatcatttgaggaagaatgtgggtattttcagttggcaacagccata acatccaacgatctggaggaaatacaagcatttttagatactgctgtgaatgcaagttgt gagggattaatcatcaaaacattaactcaagatgctacatacgcgcctgcaaaacgatca aataactggctcaagttaaagaaagactatatggatactattggtgactcgttagattta gtacccattgctgcctttcacggtcgaggaaaacgtgtcggtggatacggagcctttctt ctcgcttgttatgatattaacaaggatgaatatcaaaccatttgcaagattggcactgga ttttcagaagccatgcttgaagagcggtccaagagtcttagtcttaaagtgatcccaaaa ccgaagcagtcatactatcgatattcagataccataaatccagatgtgtggtttgaggca tctgaggtttgggaggttaaagctgcagacttgaccatcagcccggtttattgtgctgca ctcggtgcagttgatcctaataagggtatttcactacgatttccacgtttacttcgtgtt cgagaagacaagggccccgaggaagcttcatcttcagaaatggttgctgacatgtataat gctcagaagcatacccaaaataacaatcaaaatgataatgaagatgaatga

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