Helianthus annuus (common sunflower): 110876449
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Entry
110876449 CDS
T05101
Name
(RefSeq) uncharacterized protein LOC110876449
KO
K10756
replication factor C subunit 3/5
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03030
DNA replication
han03410
Base excision repair
han03420
Nucleotide excision repair
han03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110876449
03410 Base excision repair
110876449
03420 Nucleotide excision repair
110876449
03430 Mismatch repair
110876449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
han03032
]
110876449
03036 Chromosome and associated proteins [BR:
han03036
]
110876449
03400 DNA repair and recombination proteins [BR:
han03400
]
110876449
DNA replication proteins [BR:
han03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110876449
DNA Replication Termination Factors
ELG1-RFC complex
110876449
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110876449
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110876449
Check point factors
HRAD17(Rad24)-RFC complex
110876449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
Motif
Other DBs
NCBI-GeneID:
110876449
NCBI-ProteinID:
XP_021980315
LinkDB
All DBs
Position
9:complement(137807640..137811472)
Genome browser
AA seq
688 aa
AA seq
DB search
MKHGRSGYEPSDTETELNEPPWKEFTKKTLQDSLILTRRHSSKFDPEGLPPPRRHSKSPY
KTRRGDGNSRSPTPGPLPLPPGRSVSPFSKSERRRRVSSFIPARDDHLSDNDEESDASYK
PMHRLFDNEKPSYARTLSAPRLRSRDKDQQLKSDQQLKRREGRSRTPPSRRSVTPRKDRE
GSHKSTPSVVEVVANAKLVKSPVRRSPIYDSTDSLPGGDVVVSRDVVSAQKIKNEGLENR
VSPELKMFIQKKPIPLQRNKSNPITNCKTMVCSRQSSNLSDTNGKSNGSSRRFTANRRKS
QTDSWFSCIGKKSCGTNKKSPERLRAFDEASFIEKAFVVENLRQFWADKYQPTSLDGFTC
HKQQALQLKQLASQDIFPHILLKGPRGSGKKALTMALLCEIYGDTARNETRLTQVAVPVT
SSSHHVELNVHLEANAKYVLMASVKQTSSSDNAVTTEISTANLKPDYTVMVLYDVDKADE
SIQNLIKWIMDCYSDVCKLVLCCQDDVNVLESVKTRCHIIKLDAPVTQEIMEVLIQISRK
EDFDLSMKFAAKIANKSKHNLRKAIMALEACKCHNYPFVEDQPIAIGWEDVLIDLAAEIL
ADPSHKRLFITREKLQKLLVEFVHPKLILLKLIEQLLKGVEANIKRELYYWHGYYDKRLP
VGTSALLKLEEFVAKFMSIHRKTLHNHL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatggacgaagcggttacgaaccgtctgatactgaaaccgaattaaatgaacct
ccttggaaagaattcactaaaaagactttgcaagactcattaatactcaccaggaggcac
tcttcaaagtttgatcctgaagggctgccacctccaagaagacatagcaaatctccgtac
aagactcgaagaggcgatgggaattctagatcaccaactcctggcccgcttcctcttcca
cccgggagaagtgtcagcccgttttcaaaatctgaacgtaggaggcgtgtttcatcgttc
atacccgcaagagatgatcatctatcggataatgatgaagagtcggatgcctcttataag
ccgatgcacagactctttgataatgaaaagccgagttatgctagaacattatcagcacct
agacttagatcaagggacaaagatcaacaactaaagagcgatcagcagttgaaaagacga
gagggaagaagtagaacacctccatcgcgcagaagtgttactccacggaaagacagagaa
ggtagccataaaagcacaccttctgtagttgaggtggttgcaaatgcaaagttggtgaaa
agtccagtacgacgttcacccatttatgatagcacagattctcttccaggtggtgatgtt
gtcgtctctcgtgatgtggtgtcagcccagaagattaagaatgaagggctggaaaatcgt
gtcagcccggaactaaaaatgttcatacaaaaaaagcccatcccgcttcagcgtaataag
tcaaaccccattactaattgcaaaactatggtctgcagcaggcaaagtagtaatttaagc
gatacgaatgggaagtcaaatgggagttcacggaggtttactgcaaataggcgaaaaagc
cagacggattcttggttttcttgcataggaaaaaaatcttgtggtaccaacaagaagtct
cctgaaagattaagagcctttgacgaagcttcatttattgagaaagctttcgtggttgaa
aacttaagacaattctgggctgataagtatcaacctacgtcactagacgggttcacttgc
cataaacaacaagccctgcagcttaaacaacttgcatcccaggatatatttccacatatt
cttttgaagggacctcgagggtccgggaaaaaagctttgacaatggccctactatgtgag
atatatggagatactgcacggaacgaaacaaggttgactcaagtcgcggttcctgtaaca
tcaagttctcaccatgtagagcttaatgtgcacttggaagctaatgctaaatatgttctt
atggcttcagtcaaacaaacaagtagtagtgataatgcagttactactgagatcagtaca
gctaatctaaagccagattatacagtgatggtcctttatgatgtcgacaaagccgatgag
agcattcagaacttaataaagtggattatggattgctattcggatgtttgtaaactggtt
ctttgttgtcaagatgatgtcaacgttctcgaatcagtgaaaactcggtgtcatattatt
aagcttgacgctcctgtaacacaggaaattatggaagttcttattcagatatcaaggaaa
gaggactttgatttatcgatgaaatttgcagcaaagattgctaataaatccaaacataat
ttgaggaaagcaatcatggctcttgaagcctgcaagtgtcacaactatccatttgttgaa
gatcaaccaattgcaataggatgggaagatgtacttattgaccttgctgctgagatttta
gccgatccatcacacaagaggctatttatcacaagggaaaaactacagaaacttttggtg
gaatttgttcacccgaaactgattcttctgaaactcattgaacagctcctcaagggtgtt
gaagctaatatcaaaagggaactatattattggcatggatattatgataagagactccct
gttggaaccagtgccttattaaagctagaagagtttgttgcaaaattcatgagtatacac
aggaagactttacataatcatctgtga
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