Helianthus annuus (common sunflower): 110876983
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Entry
110876983 CDS
T05101
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110876983
03083 Polycomb repressive complex
110876983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110876983
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110876983
Histone modification proteins
HAT complexes
HATB complex
110876983
HDAC complexes
Sin3A-HDAC complex
110876983
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110876983
PRC2.2
110876983
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110876983
Heterochromatin formation proteins
Other heterochromatin formation proteins
110876983
Chromatin remodeling factors
NuRD complex
110876983
NuRF complex
110876983
NuRF complex (fruit fly)
110876983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
CAF1C_H4-bd
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_NOL10_N
MIOS_WD40
Beta-prop_RIG_1st
NBCH_WD40
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR19_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110876983
NCBI-ProteinID:
XP_021980835
LinkDB
All DBs
Position
11:complement(54820620..54824427)
Genome browser
AA seq
423 aa
AA seq
DB search
MGKDDDDMRGEMEERLINEEYKVWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPAGKD
YSVQKLILGTHTSENEPNYLMLAQVQLPLEDAEYDARHYDDDRSDFGGFGGTNGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLDAMQIFKVHDGVVEDVAWHLRHE
YLFGSCGDDQYLHIWDLRSPSVTKPVQSVMAHQSEVNCLAFNPFNEWVLATGSTDKTVKL
FDLRKLNTALHTFDCHKEEVFQVGWNPENETILASCCLGRRLMVWDLSRIDQEQTPEDAE
DGPPELLFIHGGHTSKVSDFSWNPCEEWVVASVAEDNILQIWQMAENIYHDEDETPAEES
RGA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagatgatgatgatatgaggggtgaaatggaagaaagactaatcaacgaagaa
tacaaagtgtggaaaaagaacacaccctttttgtacgatctggtcatcacacacgcactc
gagtggccttcactcaccgttgagtggctcccggaccgtgatgagcccgccggaaaagat
tactccgttcagaagctgattcttgggacccacacctcggaaaacgagcccaattatctt
atgctggctcaggttcagttgcctcttgaagatgctgagtatgatgctcgtcattacgat
gatgatcgatctgattttggtgggtttggcgggactaatggaaaggtacaaataattcag
cagataaatcatgatggagaggtgaacagggctcgctacatgcctcaaaactcgttcatt
atcgctacaaaaactgtcagtgccgaagtttacgtctttgattacagcaaacacccgtct
aaacctcctctagacggagcatgcagtcctgatttgagactaaggggccacaacaccgag
ggatacggcttatcatggagtaagtttaaacagggtcatttgcttagcggttctgatgat
gctcaaatttgcttatgggacattaacggaactcccaaaaataaatcacttgacgccatg
caaatattcaaagttcatgatggggttgtagaagacgtggcgtggcatctgaggcatgaa
tatcttttcggttcgtgtggggatgatcagtatttgcacatatgggatctccggtctccg
tctgttactaagcctgtccaaagtgtaatggctcaccaaagtgaagtcaactgcctagct
tttaatccttttaatgaatgggttttggcaaccggatcaactgacaagactgttaagtta
tttgacttacgaaaactcaacactgctctccatacctttgattgtcacaaggaggaagtg
ttccaggttggatggaatcctgagaatgagacgattttagcttcttgttgtcttggtaga
cgactaatggtgtgggatcttagcaggattgaccaggaacaaacacctgaggacgctgaa
gatggcccaccagaactgctattcattcatgggggacatacaagcaaagtttcggatttc
tcatggaacccgtgtgaagaatgggtggtcgcgagtgtcgccgaggataacatacttcaa
atctggcagatggctgaaaacatctaccatgatgaagacgaaacacctgcagaggaatcc
cgaggtgcatga
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