Helianthus annuus (common sunflower): 110877308
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Entry
110877308 CDS
T05101
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110877308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110877308
03036 Chromosome and associated proteins [BR:
han03036
]
110877308
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110877308
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110877308
PBAF complex
110877308
GBAF(ncBAF) complex
110877308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110877308
NCBI-ProteinID:
XP_021981147
LinkDB
All DBs
Position
16:108913030..108920030
Genome browser
AA seq
490 aa
AA seq
DB search
MATNSGGSDTPLKSQPEPIPAPENQNPQTFNSSPNPIPVTHSKFPTPATVSSRPKEVNSV
PESDVIHVPSYSRWFSWNNIHECEVRHLPEFFDGKSPSKTPKVYKYYRNTIVKKFRDSIK
ENPPSKENPTPKITFTEVRKCIIGDVGSVRKVFDFLESWGLINYFGPPMTKAQLKWEDKE
SKNVTAAAQPNSDPAGANLVGDASAAKKKFCSSCNLPCTIACFSNIKKDTTFCARCYVRA
GVNSADFKRVEISEDVKADWTEKETLHLLEAIMHYGDDWKKVSEHVVGRSEKECVDRFIK
LPFGEQYIGPPDSVDPEEIFCKGTDQLDTESNPSKKMRPTPFDDASNPILAQAAFLSTLV
GVEVAERAASAAVKALTEVNNGTSKEFLESSAGDARNNDSVTTNGKNNANSFEGVYLEAK
SQLEKEEHELERTISDIVEVQAKDIHDKLVHFEELELQMEREWQQLKQMQNQLFADQLTL
LFNKKTMEQI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaactccggcggcagcgacacccccctcaaatcccaacctgaacctatcccc
gcaccggaaaatcaaaacccccaaactttcaattcgtccccaaaccccattccggtcacc
cattccaagtttccgactcctgccaccgttagttcacggccaaaggaagttaattcggtg
cctgaatctgatgttattcatgttcctagctattctaggtggttttcttggaacaacatt
cacgaatgtgaggtgcgacatctgccagaattttttgacggaaagtcaccatctaaaacc
ccaaaagtttacaaatactacagaaacacaatagttaaaaaattcagagacagtatcaaa
gagaacccaccatctaaagaaaaccccacgccaaaaataacgttcactgaggtccgtaaa
tgcataattggagacgtggggtccgtccggaaggttttcgatttcttggaatcatggggt
ttgattaattacttcggcccaccaatgacaaaggctcagttaaaatgggaagataaagaa
agtaaaaatgttactgcagccgcacagccgaacagtgatccagctggcgctaatttggtc
ggcgatgctagtgctgcaaagaagaaattttgcagtagctgcaatttgccttgcaccatc
gcgtgtttttctaacattaagaaagatacgacattttgtgcaaggtgttatgttcgagct
ggagttaactcagcagattttaaacgagtggaaatcagtgaagatgtaaaagctgactgg
accgaaaaagagacgttgcaccttctagaagcaattatgcattatggtgatgactggaaa
aaggtatcagagcatgttgttggtagaagtgaaaaagaatgcgtagaccgttttatcaag
cttccttttggagagcaatatattgggcctcctgattcagttgatcctgaggaaattttt
tgtaaaggtacagatcagcttgataccgaatcgaatccgagcaaaaagatgcgacccaca
ccgtttgatgatgcaagcaacccgatcttggctcaggctgctttcctctcaacattggtg
ggtgtagaggttgcagaaagagctgcttctgcagctgtaaaggctttgactgaagtcaac
aacggaacgagtaaagaatttcttgaatcctctgctggtgatgcgagaaataatgattca
gtaacgaccaatggtaagaacaatgcaaattcatttgaaggagtttatcttgaagcaaaa
tcgcagcttgagaaggaggaacatgagttggagagaaccatatcagacattgttgaagtg
caggcgaaggatatccatgataaacttgttcattttgaggagcttgaactacaaatggag
agagaatggcagcaactaaaacaaatgcagaatcagttgtttgctgatcagctaactctt
ttgtttaacaaaaaaacaatggaacaaatatga
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