Helianthus annuus (common sunflower): 110877654
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Entry
110877654 CDS
T05101
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110877654
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110877654
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
110877654
NCBI-ProteinID:
XP_021981509
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Position
9:complement(74918742..74924240)
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AA seq
658 aa
AA seq
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MGIWTRVIESICTCGGKGEEMSSTGVRLRINDHHVVIDNGIVQVTLSNPEGLLTGLQYNG
LDNLLEVLNQPGNRGYWDVVWSALDDSGRKGVFEVINATSFKVIVETEEQVEVSFSRPWD
PSLKGKLAPINIDKRFVLLRGSSGFYTYAIYEHLGSEEWQAFSLGETRIAFKLRKDKFHY
MAVADDRRRYMPLPDDRLPGRAQPLAFQEAVSLINPVVPEFKGEVDDKYQYTCENRDLMV
HGWISHDPPVGFWQITPSNEFRSGGPLKQNLCSHVGPTCLAVFVGAHYAGDDQVPKFGQG
EPWKKVFGPVFIYLNSTTCGQDPLTLWDDAKRQTMVEVNSWPYSFPASEDFPKSHERGNV
RGRLLVRDRYIQDDEIPGNGAYVGLAPPGDVGSWQRECKDYQFWSEADSSGDFSIKSVRC
GEYNLYAWVPGFLGDYRYHLPITITPGCDINVGNLVYEPPREGPTLWEIGIPDRSAAEFH
VPDPDPKYVNPLFLNNPKSNFRQYGLWERYGELYPYTDLVFTVGESDYRKDWFYAQVPRR
KEDNSYEGTTWQIKFRLENVQRAASYKLRMALAGATLAEVQVRVNDPNKARPLFTTGLIG
RDNAIARHGIHGLYWLYNIDVSGSLLVEGENIVYLKQPRNQSPFQGIMYDYLRLEGPA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttggacaagagtgatcgaaagcatctgcacttgtggaggaaaaggggaggaa
atgtcatctactggcgtaagattgcggatcaacgatcaccatgtggtgattgataatggc
atagtgcaagtcacattatccaatccagaggggcttctcactgggctccaatacaatggc
cttgacaatcttctcgaggttcttaatcaaccaggtaatagaggctactgggatgttgtc
tggagtgctctagatgactcagggagaaaaggagtatttgaagtgatcaatgcaacaagc
tttaaggttatagtggaaacagaggaacaagttgaagtttccttttcaagaccatgggat
ccttcccttaaggggaaacttgctcctattaacatagacaaaaggtttgttttgcttcgt
ggttcttctggtttctacacatatgccatatatgaacacttgggttctgaagaatggcag
gctttcagccttggggaaacgcgaattgcattcaaactcagaaaagacaagtttcactac
atggcagtggcagatgatagaagaagatacatgcccctgccagatgaccgattaccagga
agagcccaaccccttgcatttcaggaagccgtttccctaattaacccagttgtgcctgaa
ttcaaaggagaggtggatgataagtatcagtatacttgtgagaacagagatctgatggta
cacgggtggatatcacatgaccctccggttggattttggcaaattacgcccagcaatgag
ttcaggagcggtgggccactcaagcagaacctctgttctcatgtgggacccacttgctta
gctgttttcgttggtgctcattatgccggggatgatcaagttccaaagtttgggcagggg
gagccatggaaaaaagtgttcgggccggttttcatctatcttaattcaactacgtgtggt
caagatcctcttacgctttgggatgatgccaaaagacagacgatggttgaggtaaatagc
tggccttatagctttccagcatccgaggattttccaaaatcacatgaacgaggaaatgtc
agaggtagattactcgtccgggacagatacattcaggatgatgagataccagggaatggt
gcatatgtagggttagctccaccaggagatgttggatcatggcaaagagaatgcaaggac
tatcaattttggagtgaagctgatagcagtggagatttctccattaagagtgtaagatgt
ggagaatataatttgtatgcgtgggtccctggatttcttggagactacagatatcatctt
cccattaccataaccccagggtgtgatattaatgtggggaaccttgtctacgagcctcca
agagagggtcctactttgtgggaaatagggatcccagaccgatctgctgcagagttccat
gttccagaccctgaccccaaatatgtcaaccccctttttctcaataatcccaagagcaac
tttaggcagtatggcttatgggaaagatatggcgagttgtacccttatactgatttggtg
ttcaccgttggagagagtgattatcgcaaagattggttctatgctcaagttccaaggaga
aaagaagacaattcgtatgaaggaaccacatggcaaataaagtttagacttgagaatgta
caacgtgctgctagttataagctaagaatggcactggctggtgcaactcttgcagaagta
caggttcgagtaaatgatccaaacaaagcccgcccactatttacaacaggtttgataggc
cgggacaatgcgattgcaagacacgggattcatgggctttactggctgtacaacatagac
gtttctggttcattacttgttgaaggagaaaacattgtttatctaaaacaaccacggaac
caaagtccatttcaaggtattatgtatgattacttacgcttagaaggtcccgcatag
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