Helianthus annuus (common sunflower): 110877795
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Entry
110877795 CDS
T05101
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110877795
09123 Folding, sorting and degradation
03018 RNA degradation
110877795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110877795
03041 Spliceosome [BR:
han03041
]
110877795
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110877795
mRNA degradation factors
5'-3' decay
Lsm complex
110877795
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110877795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
SICA_C
Motif
Other DBs
NCBI-GeneID:
110877795
NCBI-ProteinID:
XP_021981690
LinkDB
All DBs
Position
9:55140965..55144539
Genome browser
AA seq
154 aa
AA seq
DB search
MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKNRMDRKPPGVGRGRGRGGRDDVGGGRKQGRGGGMGG
RGGSMDDGGGGRGRSQGVGGYPGGNRGGGRGGRG
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgttatcgcttctcaagacatctcaagggcatcctatgcttgtggagcttaaa
aatggtgaaacttacaatgggcatttagtaaactgtgacacctggatgaatatccatctt
cgtgaagtaatctgtacttcaaaggatggtgataggttctggaggatgcccgaatgttac
atccgcggaaacactataaagtatcttcgtgtgccagatgaggtgattgacaaggttcag
gaagaaaccaagaaccgcatggatagaaagccacctggggtaggacgtggaaggggaaga
ggcggtagggatgatgttggcggtggcagaaagcaaggaagaggcggcggcatggggggg
cgtggcggcagcatggatgatggaggaggtggtagaggcaggagccaaggagtaggaggt
tatcctggtggcaacagaggtggaggccgtggtggtcgtggatga
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integrated database retrieval system