Helianthus annuus (common sunflower): 110877989
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Entry
110877989 CDS
T05101
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110877989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110877989
Spliceosome [BR:
han03041
]
Common components
Common spliceosomal components
SR proteins
110877989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RAP1
Motif
Other DBs
NCBI-GeneID:
110877989
NCBI-ProteinID:
XP_021981924
LinkDB
All DBs
Position
4:complement(125466166..125470771)
Genome browser
AA seq
318 aa
AA seq
DB search
MDGGPRAIKEAATHTPRLFCFAPLNSIQFNSTSFGLAVSLELKMSSRFSRMIYVGNLPLD
IKEWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFANARDAEDAIRGRDGYNFDGCRLRV
ELAHGGRGQSSSGDGRGSYGGGGGGRGRGGGRFGISQRSEYRVIVRGLPSSASWQDLKDH
MRKAGDVCFAEVSRDSKGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWTKTYIEVRKYERS
PSRSRSRSLSRSRSRSRSRSRSRSRSLRRSRSKSLERSVSKSPAKSKSASPVKPERARSK
SRSRSRSRSESPRKAASP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggacctagagcaatcaaagaagcagcaacacacacgccacgcctattttgc
tttgcacctctcaattcaattcaattcaattccaccagttttgggctagctgtctctttg
gaactgaaaatgagtagccgcttctcacgaatgatttatgtcgggaaccttccgttggat
ataaaagaatgggaagtcgaggatcttttttacaagtatggacgcatattggacatagaa
ttgaaaattccacctcgtcctccgtgctattgttttgtggagtttgcaaatgcgcgagac
gctgaggatgcaattaggggccgggatggctataattttgacggttgccgcctgagggtt
gagcttgctcatggtggtcgtggacaatcatcctccggtgacggtcgtggtagctatgga
ggtggcggtggtggacgtggccgaggtggtggtcgttttggcatttcacaacgttctgag
tatcgagttattgttcgaggactaccatcatctgcttcatggcaggatcttaaggaccac
atgcgtaaggctggagatgtatgttttgccgaagtttctcgtgatagcaaagggacattt
ggtcttgttgactataccaactatgatgacatgaaatatgctataaggaagcttgatgac
accgagttcagaaatccatggacaaaaacttatattgaggtaaggaagtatgagaggagt
ccttccaggagtcgaagtaggagtctcagcagaagccgaagccggagccggagccgaagc
cggagtagaagcagaagcttgcgacgcagcaggagcaaatccttggagcgctctgtgtcg
aaatcgccagctaaatctaagtcagcatctcctgtgaagccggaaagagccaggtcaaag
tcgaggtctcggtcaaggtcaaggtcagaatcacctcgcaaggcagcaagtccttga
DBGET
integrated database retrieval system
