Helianthus annuus (common sunflower): 110878183
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Entry
110878183 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110878183
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110878183
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110878183
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF5049
Motif
Other DBs
NCBI-GeneID:
110878183
NCBI-ProteinID:
XP_021982148
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All DBs
Position
9:complement(104307950..104313759)
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AA seq
592 aa
AA seq
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MASTESSNPNRALTDTRFSDLNPPLSAEVLDALTSSGFEFCTPVQAATIPLLCSYKDVAV
DAATGSGKTLAFVVPLVEILRRTTSVKPHQVLGIIISPTRELSSQIFHVAQPFISSLSDI
KPVLLVGGSEVKSDMKKIEDEGANLLIGTPGRLHDIMDRMDILDFRNLEILILDEADRLL
DMGFQKQINSIISCLPKLRRTGLFSATQTDAVEELAKAGLRNPVRVEVRAETKSLGCSSS
SEHPTSSKTPSGLHIEFIKCEADKKSSQLVDFFIKNKSKKMIVYFMTCACVDYWGVVLPR
LAALKGLPLISLHGKMKQSAREKALASFTSLSGGILLCTDVAARGLDIPGVDCIVQYDLP
QDPNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIKRIPIEESMCSEEALDVVPHL
RAAAQKDRDVMEKGLRAFVSYIRAYKEHYCNFILRWKDLEIGKLGMGYGLLQLPSMSEVK
QNSLSTDGFIAVEDLNLAEIKFKDKNREKQRKKNLQVKKEVKQQEAKTHKAKDKAKNTVT
VMKKRTAKKRRAIQSAEDDEELTREYRLLKKLKKGTINESEYAKLTGTEDLL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactgaatcttcaaaccctaacagagcattaaccgacactcgtttctccgac
ctcaatcccccgctttccgccgaagtccttgacgccttaacttcttctggatttgagttc
tgcactccggttcaggccgccactatacccttgctgtgcagctacaaggacgtcgccgtc
gacgccgccactggttccggtaaaactctagcgtttgttgttccgctcgttgaaatactc
cgccgcacaacttctgttaaacctcaccaggtcttggggatcatcatatctccaacaaga
gagttatcatcacaaatattccatgttgcacaaccgtttatttcatcgctttccgatatt
aagccggtgctccttgtcggaggatcagaagttaaatcagacatgaagaaaatagaagat
gaaggagctaatttgttaataggtacacccggtagactacacgacataatggatcgcatg
gatatcttggatttccgtaaccttgagattttgattttggatgaagctgatagactactg
gatatggggttccagaagcagattaactcgataatttcgtgcttaccgaagctacgtaga
accggtcttttttcagccactcaaactgacgcagttgaagaactagcgaaagcaggattg
aggaaccccgttagggttgaagttcgtgcagagactaaatcgttaggatgttcttcttca
tcagagcacccgacctcctcaaaaacaccttcaggtctacatattgagtttatcaaatgt
gaagcggataagaagtcgtcacagctagtagacttctttattaagaataagtcgaaaaag
atgatagtctacttcatgacttgtgcgtgtgttgactattggggagttgtacttccacgt
cttgccgctttaaaagggttgcctttaatttctcttcatgggaagatgaagcagtcagca
agggagaaagctttagcgtcatttacatctctttcgggtggcattcttctgtgcactgat
gttgcagcacgtggactcgacattccaggcgtcgattgcatagtgcagtatgacctgcct
caggatcctaatgtgttcattcatagagttggccggaccgctagattaggacgacaagga
agcgccattgtttttcttttaccaaaggaggaagcgtatgtagagtttttgcgtattaaa
aggattccaatagaagagagtatgtgctccgaagaggcacttgatgtggttcctcacttg
cgtgctgctgcacaaaaggatcgtgatgtcatggaaaaaggactaagagcgtttgtctcc
tacattcgtgcttataaagagcattactgcaatttcattctcagatggaaagatctagag
atcggaaaattaggcatgggatatggcttattacagctaccgtcgatgtcggaggtaaag
caaaactcactttcgactgacggttttatcgctgttgaagatttaaatctggcggagatc
aagttcaaggataaaaacagggaaaaacaaagaaagaaaaacttgcaggtgaagaaagaa
gtgaagcagcaagaagcaaagactcacaaggctaaagacaaagcgaagaacactgttacc
gtcatgaagaagcgaacggccaagaaaagacgcgctatacagtccgctgaggatgatgaa
gaacttactagagaatatcgtcttctgaagaaactaaaaaaaggcactattaatgaaagc
gaatatgcaaagttaactggaactgaggatttgctttga
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