Helianthus annuus (common sunflower): 110878325
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Entry
110878325 CDS
T05101
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110878325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110878325
03009 Ribosome biogenesis [BR:
han03009
]
110878325
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110878325
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110878325
Complex B
110878325
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110878325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110878325
NCBI-ProteinID:
XP_021982299
LinkDB
All DBs
Position
9:117862890..117870712
Genome browser
AA seq
688 aa
AA seq
DB search
MAATATETAATPTAAPRYAPEDPTLPKPWKGLVDGTTGYLYYWNPETNVTQYERPSGSKG
SSQPHKSSSVAISSAVQVQKSSHQENGSVDDYRYGRSSNGGSKHSSGTRGYDSTRSGSHN
SHSHSSGTVAAGPGGTSGRPYGPSVGSGLSPDAYRQQHEITVTGDNVPPPFTSFEDTGFP
SELLREVLEAGFTAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRVHKN
RQMGPTVLVLSPTRELATQIQAEAVKFGRSSKILCTCLYGGAPKGPQLRELDRGTDIVVA
TPGRLNDILEMRRLSLSQVTFLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWP
KEVRKIAADLLVNPIQVNIGNVDELVANKAITQHIEVLAPMEKNRRLELILRSQEPRSKV
IIFCSTKKMCDQLARSLTRQFAAAAIHGDKSQGERDYVLNQFRSGRSPVLVATDVAARGL
DIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGEAYTFFTEQDAKHASDLVKVLEGANQ
RVPKELRDMAARSGGMGGRSRRWGSGPSYGSRDGGRGGRSDSSFGGRSSGGGRGGRSDSS
FGGRSSWNSGRGGAHDSNRGGYNHRSFHESIAGAGEKRGRSRSPPGKYGSGWGRGSRSRS
PERFDKPPRSNGPRFRPSDEDEEGLIRD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcgaccgagacagcagcgacacctactgctgctccacgttacgctcca
gaggaccccacccttcctaaaccttggaaagggttagttgacggtacaactggatatctc
tactattggaacccagagaccaatgttactcaatatgagcggccctcagggtctaagggc
tcttctcaaccacacaaatcgtcttcagtggccataagttctgcagttcaggtgcaaaag
tcttcacatcaagagaatggctctgtcgatgattatagatacggtagaagcagcaatggt
ggatcaaagcattcatctggaacaagaggctacgatagtacaagaagcgggtcccataat
tcacacagccattcaagcgggacagtagctgcgggacccggaggaacttcaggacgacct
tatgggccttcagttggaagtggtttatccccagatgcttatcgccagcagcatgagata
actgtaactggagacaatgtgcctccaccttttacatcatttgaagataccgggtttcca
tctgagttacttagagaggtacttgaggctgggtttacagccccgactccaatacaagca
cagtcatggcctgttgcccttcaaagtcgtgacattgtagccattgcaaaaacggggtca
ggaaaaaccttgggttacttgattcctgcatttattcaccttaaaagagttcacaagaat
cgtcaaatgggtcccactgttttggttttatcacccaccagagaattagctacccagata
caagctgaagccgtcaagtttggaagatcatcaaagatactgtgcacttgtttgtatgga
ggagcaccgaagggcccccagctaagagaattagatcgcgggacggatattgtggttgca
acacctggtcgtttgaacgatattttggagatgagaagactaagcttaagtcaagttacg
tttttggtgttggatgaagctgatcggatgttggacatgggatttgaacctcagatcagg
aaaattgttaaggaggtgccagctcgccgtcagacacttatgtacaccgccacttggcca
aaggaggtccgcaaaatagctgcagatttgttggttaatccaattcaggtcaacattggc
aatgtcgacgagcttgttgccaacaaggctatcactcagcatattgaggttttggctcca
atggagaaaaacagacggttggaactaatcttaagatctcaagaaccgagatcgaaggtc
atcatcttctgctcaaccaaaaagatgtgtgatcagctggctcgcagcttgacccgtcaa
tttgctgccgctgctatccatggagacaaatctcagggtgaaagagattacgtgttgaat
cagtttcgcagtggccgctctcctgtgcttgtagcaactgatgttgctgctcgtggatta
gatatcaaggacatcagggtggtggtcaattacgactttcctacgggagtggaggactac
gtgcaccgaatcggaaggaccgggagggcaggtgcgaccggagaggcttatacgtttttc
acagaacaggacgcaaaacatgcttctgatctagtcaaagtattggaaggtgcaaatcaa
cgtgttccgaaggaacttcgagacatggcggcacgtagcggtgggatgggcggccggtct
agacgttggggctctggtccgagttacggaagtcgtgatggaggtcgtggaggacggtcc
gattcaagctttggtggaaggagtagcggcggaggtcgtggaggacgctctgattcaagc
tttggtggaaggagtagttggaactccgggaggggtggagcccatgacagcaataggggt
ggttacaatcataggagcttccatgaaagcattgcgggtgctggagagaagcgaggcagg
agcagaagtccacctggcaaatacggttcaggatggggtaggggcagtcgtagccgcagc
cctgagaggtttgataagccacctagatcaaacggccctcgttttcgtccttctgatgaa
gatgaggaaggcctgatccgggattaa
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