KEGG   Helianthus annuus (common sunflower): 110878333
Entry
110878333         CDS       T05101                                 
Name
(RefSeq) protein RST1 isoform X1
  KO
K27498  focadhesin
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110878333
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110878333
SSDB
Motif
Pfam: DUF3730
Other DBs
NCBI-GeneID: 110878333
NCBI-ProteinID: XP_021982311
LinkDB
Position
9:complement(118510697..118528238)
AA seq 1831 aa
MDSYNHLQERTRLPQPSLQKLAVISIFEKLRSSTALTGPDSDPTHAIAQCLNSNSPAVVD
QSVRELCVLVKDSKLEVSRALVELQSALEGSDSRFVNVFVKAIGFLVRLGFQNDNVSFQF
QSSEAHPFVKILSSRTEVQSELVRQVLLFITQNRHLGMEGVCEFLRPFLNFLVIQMSSSA
TTSSFARNLLSSIASLCCSFSQDAIPVFKLLMGCFKYIRCNSAEDVTNVSYLMGTIVDAF
VAVLTQLAGNGVLIHEAQLSGAELLEMVFSLCTDIHKYSGGEECIFDMSRRLIVVQAELD
LKCIPEASSVMLSLFVSLIQSELEHIQLSILKLVLDLIKWKNRNEAVVDVHEEILFVFPA
INLMSSPSKYVKEAASELLIILRKLSASFLVTPINELLMEERFPRVSRLEDIIFRVFRHL
WFQDQNFISDSFYLQRLLVGHKVVEEKQNSVQTWTVATTEYCKRMVEIKKSSLPKSQANE
IFLHEILPLLGAIASILIVHPTLGDSAVELLAVTGNMDPTLGVPLFLVILFYHNIFSGKS
EEIDFHDKLHLLQLKLLRMLPSLVSHPAMIPLVVQTILPMLQKDANPVLYATALRLLCKT
WEINDRVFGSLQGLLLPEAFTLFKYERSICISTAVTIRDVCQKNPDRGVDIILSVEACIE
STDAIIKALGIQSLSLLCEADVIDFYTAWGVIAKYVSSYSTDPVVAKNVCLLLRWGAMDA
EAYPEYATGVMQIIWEVATSKHPSHVSSWANARASAFEALTRYEVPHIRQFITDFREKNT
EALVSEIDPKVLEAMEKFETKIITHEHITRRRLVKEKRAPANKIEKLLDVFPRVIGLSGT
NNKVRELPGAALFHLSFSAKDKNNQGGSKALHDLHGRYENALVEIAASLQLSRNTVVALL
SLQSWKPFLQRWLRGCITLLDVKASSSVLDTTSKAADDILMRMTQTAMKSIPRSAENIGL
AVGALCLVLPPSAHATKASASKFLLSWLFQHEHEYRQWSAAISLGIISSCLHVTDHKQKS
QTINALLEVACMSKSTLVRGACGVALGYSCQDLLTRFQAGDDYEMHETELLGKIIRTLCR
LIDQYAQFSTTTLQTLSEYFPQVTNTTDPYITPSFSNKSSDYVEEDIWGVSGLIIGLGSS
VTAIYRSGRIDAAKKIKNLITSWIPLENRSKPVLSTGACLAIPFVVSFSQKVELIDGAEL
EYLASGYRDLINELVSTKKSGAFRQSLLMASCVGAGNFLGCVLNEGIHSLDATCVRELLD
IFKKIYSSSQPPLLHLGAMLGVVNALGAGGGTLFLHCPLSFSSSNSKHKESSYVTGPLFS
NSVMELSLTSLIQDIFLVAQNSDDNQLQHYASWAVSFLRHYIWSSDLHNEDRSKPNSASQ
PFPEDSVVMKLSLWLMNLNGSVIATPSHANTVATVLRCLTNAPRLPQLDWGPIIRRCMRY
EEQVSETSQGEYNLENRKLREECLVFSLVHGSNFDALLTFLDELFDLSRFKMLEMNLQLC
ILSHLPHTLKIFSGSRLEKLFDDVANFVQSPFSSDKVYDPELKSLLRTSCWKGVCLCFEE
AYLDSEKLMPNFENYMELLFTLLPEFSGLRFLEYGGTYEMEEWSEAVRCLGKAPLHWLLH
LLQIPETSFNQESHQFLDAKKKMIARARLVENGSIPLIELSKLKPYILNIRSDGIWDVLV
EVVMALQHAEGSVKRQWLVSAAEISCVTNYPTTAMQFIGLLCGSWSKYMPLLIVNPHIVL
SDLPVTLTSLLLDDTNWAVVADSVVSLMWTSTKRIYDYVTNTNDFSTQGSLDDSEKDTGV
FLLKVMHHTCVAFKDHLSPEERLMLANLTVP
NT seq 5496 nt   +upstreamnt  +downstreamnt
atggactcatataaccatcttcaagaaagaactcgtttaccacaaccatcactccaaaaa
ctagcggttatctccatattcgagaagctccgatcatctactgctctcaccggacccgat
tccgacccgacacacgccattgctcaatgcctcaactcaaattcaccggcggttgttgat
caatcggttcgtgaactttgtgttctcgtaaaggactctaaattggaggtttctagggcg
ttagtggaactccagtcggctctcgaaggctctgattcgcgttttgttaacgtgtttgtt
aaagcgatagggtttctcgttcggttagggtttcaaaatgataatgtttcgtttcagttc
cagtcttctgaggctcatccttttgttaagattctttcttcccgaacagaggttcaatct
gagctcgtgcgacaggtgcttctatttattacgcagaataggcatttgggaatggaggga
gtgtgtgaattcttaagaccgttcttaaactttttggtcatacaaatgtcatcatcagcg
acaacgtcttcatttgcaaggaatcttttgtcctcgattgcttcgctgtgttgttcattt
tctcaggatgcaattcctgtttttaagctgttgatgggatgctttaaatatatccgttgc
aacagtgcagaagacgtgactaatgtatcttatctcatggggactatagtggatgcattt
gttgcggttttgacccaactggctggtaatggtgtgctgattcatgaagcacaattaagc
ggagcagaacttttagagatggtgttttcactgtgcacagatattcacaagtattccggt
ggtgaagagtgcatatttgatatgtcaaggcgtttaatagttgttcaggcagaacttgat
ttgaaatgtatacccgaagcgtcatccgtgatgctgtcactatttgttagcctcattcag
tcagagctggaacacatacaattatcaatattaaagttggttctcgatcttataaagtgg
aaaaacagaaatgaggccgtagttgacgtgcatgaagagattttatttgtttttcctgcg
atcaatcttatgtcatctccttccaaatacgttaaagaagccgcatctgagttgcttatt
atcttacgaaagctttctgcaagtttcctggttacccccataaatgaattgctcatggaa
gaaagattcccacgtgtcagcagattggaagacatcatatttagggtctttcgtcatttg
tggttccaggatcaaaattttatttctgattctttttatctacaacggctattagttggc
cataaagttgtagaagaaaagcagaattccgttcaaacttggacagtcgcaacaacagag
tattgtaaaaggatggttgaaattaaaaaatcatcgcttccaaagtctcaggcaaacgag
atctttctacatgaaattctgccactgcttggtgcaattgccagtattctaattgtgcat
cctacgttgggggactctgcagtagaactcctagctgttactggcaatatggaccccaca
cttggtgttccgttgtttttagtaatattgttttaccataacatattctctggtaaatct
gaagaaatagactttcatgacaaattgcatttgctgcagctaaaacttttaagaatgctt
ccctctcttgtgtcacatcctgcaatgataccacttgtagttcagacaatcttgccaatg
cttcaaaaagatgcaaacccagtgttatatgctactgctttgcgtctgctttgtaagact
tgggagatcaatgatcgtgtattcggaagtttgcagggcttattacttccagaagcattc
accctgtttaagtatgagagaagtatctgtataagcacggctgttactattcgggatgtt
tgtcaaaaaaatcccgacaggggcgtagacattatcttgtcggttgaggcgtgcattgaa
agcacagatgctataattaaagctcttggtattcaaagcctttcccttctctgtgaagct
gatgtgattgatttttatactgcttggggtgtgatagcaaagtatgtctcgagttattcc
accgacccagttgttgcaaagaatgtatgcctgcttttaagatggggtgcaatggatgcc
gaagcatatccagaatatgcaacgggcgttatgcagataatatgggaagttgccacatcc
aaacaccctagtcatgtctcttcatgggcaaatgctagagcatctgcttttgaggcatta
actcgttatgaggtacctcatatccgacagttcataacggatttcagggaaaagaacaca
gaggcgcttgtttctgagattgaccccaaagttcttgaggccatggagaaatttgaaacg
aagataataacacacgaacacatcacaaggcggagactagtgaaggagaaaagagcgccc
gccaacaagattgagaaattgctagatgtctttcctcgggttattggtctttcaggaact
aataataaagtaagagaactacctggtgcagcactatttcacctttctttcagtgcaaaa
gataaaaataaccaaggaggatcaaaggctttgcacgatttacatggcagatatgagaat
gcattagtggagatagctgcatcactacagttgtcaaggaatacagtagtggcacttctt
tcactgcaatcttggaaaccgtttctgcaacgttggctgcggggttgcatcacgttattg
gatgttaaggcgtcctccagtgtgttggatacaacttccaaagcagctgatgatattctc
atgcgtatgacacaaacagctatgaaatctatccctagatctgctgagaatattggacta
gctgtgggtgcactttgtctggtccttccaccgtctgctcatgctacaaaagcaagcgcc
tccaagtttctactgagctggctatttcagcatgaacatgaatatcgacagtggtcggct
gcaatttcgcttggaatcatctcaagttgcttgcatgtgactgatcataaacaaaaatcc
caaaccatcaatgcacttcttgaggttgcgtgcatgagtaaaagcactctggtaagaggg
gcttgtggagttgctttaggttattcatgtcaagatcttcttacacgttttcaagcagga
gatgactacgagatgcatgaaactgaactacttggaaagattatcaggactttatgtcga
ttaatagatcagtatgcacaattttcaactaccactcttcaaaccctatctgaatacttc
cctcaagtaacaaacactactgatccatatattaccccaagtttttccaacaagagttct
gattacgtggaggaagatatatggggtgtttcaggactcatcattggtttaggaagttct
gttactgcaatatataggtcagggcgtatagacgcagctaagaaaataaaaaacctaatt
acatcatggattcctcttgaaaatcgctcaaaaccagttttatcaacgggtgcttgtctt
gcaattccgtttgtagtatctttttctcagaaagtagaactgattgacggtgcggagctg
gaatatcttgcgagtgggtatagagacctcattaacgaactggtttctaccaaaaaatcg
ggagcatttcgtcagagcttgttaatggcatcttgtgttggagctggtaattttcttgga
tgcgttttaaatgaagggatccattcactggatgccacgtgtgtcagggaattactggat
attttcaaaaaaatctactcaagttctcagcctccgctattgcatttgggtgcaatgctt
ggagttgtaaatgcattaggagctggcggtgggaccttgtttctgcactgccctttatcc
ttttcatcatctaattctaaacacaaggaatcttcttatgtaactggtcctttattctca
aattctgttatggagcttagtctgacatcattaatacaagacatctttcttgttgctcaa
aattctgatgacaaccaactgcaacactatgcatcttgggcagtttcttttcttcgacat
tacatctggtctagtgatcttcacaatgaagacagatcaaaacctaattctgcatcccaa
ccattccctgaggatagcgtagtcatgaaacttagcctgtggctaatgaatctaaacggc
tcagtgattgctaccccttcacacgccaacacagttgcaactgttctgcgatgtctcacc
aatgctccaaggttgccacagcttgattgggggccaatcattagacggtgcatgcgatac
gaggaacaggtttccgaaacatcacaaggagaatataatcttgaaaaccgaaaactgagg
gaggaatgtttagtattctctttggttcacggcagcaacttcgatgctttgcttactttt
ctcgatgagttgtttgacctctcgaggttcaaaatgcttgaaatgaatctacagttgtgc
atcctttctcacctgccacacacgttaaagatattctctggatctaggcttgaaaagtta
tttgacgatgtggcgaattttgtacagtcgcctttctcctctgacaaagtatatgatcct
gaactgaaaagcctgttaagaacatcttgctggaagggtgtttgcttgtgttttgaagaa
gcttatcttgattccgaaaaacttatgcccaactttgagaattatatggagttgctcttt
acattgttgcccgagttttcagggttacgatttttggaatatggcgggacttatgaaatg
gaggagtggtctgaagcagtaagatgtcttgggaaggctcctctccactggttattacat
cttctgcagattccggagacgagtttcaatcaggaaagccatcagtttttagatgcaaag
aaaaagatgatagctagagcaagactggtggagaatggttctattccgctaattgaactg
tcaaagctaaaaccttacatattaaatatcagatctgatggtatatgggacgttttggta
gaagtcgtgatggctttgcaacatgctgaaggaagtgtcaaacgacagtggcttgtttcc
gctgcagaaattagttgtgtcacaaattaccctacgacggctatgcagtttattggttta
ctatgtggtagctggtccaagtatatgcctcttctgattgtgaaccctcatattgtattg
agcgacctacccgtaacccttacttctctactgttagatgatactaactgggcagtagtg
gctgattcggtggtttcgcttatgtggacttcaaccaagcgtatatatgactatgtcact
aacactaatgacttttcaacccaagggtcacttgatgattcagagaaagacacgggtgtg
ttcctgttaaaggtgatgcatcatacttgtgttgctttcaaagaccatctgtctcctgag
gaacggctcatgcttgccaacttgactgttccctga

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