Helianthus annuus (common sunflower): 110878491
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Entry
110878491 CDS
T05101
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110878491
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110878491
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110878491
NCBI-ProteinID:
XP_021982495
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Position
1:131878451..131880765
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AA seq
392 aa
AA seq
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MSNHIFLTLTTIIATVLFTRTTAVTYNVKNLGAKPNGRTDATKAFMAAWSSACGSTKAAT
MYVPKGRYMVGGLKFNGPCRSGAITVRIDGTLVAPSNYFVLGNAKYWLLFHGVQGVTIVG
GTLDAQGAGLWACKSSGKRNCPDGATSLAISNSNNVIVYGLSSVNSQMFHIAVNGCRNVR
VVGANVVAPWNSPNTDGIHVQLSTGVTIMNSKISTGDDCVSIGPGATNLWIEGVACGPGH
GISIGSLGKDLNEQGVSNVTVKRVTFKGTDNGLRIKAWARPSNGFVNGVLFQNAVMTNVE
NPIVIDQHYCPGGKNCPRQVSGVKISNVKYQDVHGTSATKVAVKFDCSKKYPCRGITMRD
VNLSFKNQLPASAYCVNAAGTTSGVMKPTSCF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccatatttttctaacactcaccaccatcattgcaaccgtcttgttcactaga
accaccgcggttacttacaatgtgaagaacttgggtgcgaaaccgaatggtagaacggat
gcaaccaaggcgtttatggctgcctggtcgagcgcatgtggctcgaccaaggcggctacc
atgtacgttccgaaaggaaggtacatggttggtgggctaaagtttaatggcccgtgtagg
agcggagccattacggtccgcattgatggaaccctggtggctccgtcgaattattttgtt
cttggtaatgctaagtattggctgctttttcatggtgttcaaggggtgactattgtgggt
ggtaccttggatgctcaaggtgcgggtttgtgggcttgtaagtcgtctggtaaaagaaac
tgccctgatggagccacgagtttagcgatttccaactcgaacaatgttatagtgtacgga
ttgagttcagtgaacagtcaaatgttccacattgccgtaaacggttgtcgtaacgtgagg
gtggtgggggcaaacgtggtggcgccgtggaacagcccgaacactgacggcatccacgtg
cagttatccactggagtcaccattatgaactccaaaatcagcaccggtgatgactgtgta
tccatcggtccaggtgcaaccaatttatggatcgaaggtgtcgcttgtggaccgggccat
ggcatcagcattgggagtttaggaaaggacttaaacgaacaaggcgtgtcgaatgtgacc
gtgaaaagggttacttttaaagggaccgataacgggttaaggatcaaggcgtgggcgagg
ccgagcaatgggtttgttaacggtgttttgttccagaacgcggtcatgaccaatgtagag
aacccgatcgttattgatcagcattattgcccgggtggcaagaattgtccccgtcaggtc
tctggcgtaaaaataagtaacgtgaagtatcaagatgtgcacgggacatcggccacgaaa
gtagcagtgaagtttgattgcagcaaaaagtatccatgtaggggaatcacgatgcgagac
gtgaatttgagcttcaaaaaccagcttccagcgtctgcatattgcgttaacgccgctgga
acaacttccggtgtgatgaagcccacaagctgtttttag
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