Helianthus annuus (common sunflower): 110878514
Help
Entry
110878514 CDS
T05101
Name
(RefSeq) LOW QUALITY PROTEIN: F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110878514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110878514
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110878514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
110878514
NCBI-ProteinID:
XP_035833452
LinkDB
All DBs
Position
9:124483687..124488430
Genome browser
AA seq
282 aa
AA seq
DB search
MRAPLSKCEPAHFFNFIKEGSLFQQLVDNGVETIANSYHDLEDLDLSKSFKLSDRSLYAL
AHGCQKLIKLNISGCSSFSDNALAYLSSYCRQLKVLNLCGCVKAAPDQALKAIRYNCSQL
HSLNLGWCEEVGDAGETSLAYGCHDLHALDLCGCILIADESVIALANNCLHLTSLDLYYC
RNITDRAMYALAHIRVKNRNQMWDGVKTGDEDEDGLMSLNISQCTALTPPAVQALCDSFP
ALHTCPGRHSLIISGCLNPTSIPCACAFQAHHEVNTLTHHAY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctcctttaagcaagtgcgaacctgcccacttcttcaacttcatcaaagaaggt
tccctgttccaacagttagttgacaatggggttgaaaccattgcaaatagctatcatgat
cttgaagatcttgaccttagcaagagctttaagcttagtgatcggtcgttatatgctttg
gcacatggttgtcaaaagcttattaagctcaatatcagcggatgctcttcgtttagcgat
aacgctcttgcatatctaagtagttactgcagacaattgaaagttttaaatctttgtgga
tgcgtaaaagctgcacctgatcaggcattgaaggcaatcagatacaactgtagtcaactt
cattcattgaacctaggatggtgtgaggaagttggtgacgctggggaaacgagtttagcg
tatggctgtcacgatctgcatgcactcgacttatgtggttgcattcttatagcagatgag
agtgtcatagccctagcaaacaattgcctgcatctaacatctttagatctctactactgt
cgaaacatcaccgaccgagcgatgtacgcgttggcacatattcgagtgaaaaacaggaac
caaatgtgggatggggttaaaaccggggatgaggatgaagacgggctcatgagtctcaac
atcagtcaatgcactgctttaacaccgccggcggttcaggctctttgtgattcatttcca
gcgcttcatacatgcccgggtaggcattcacttatcataagtggttgtttgaatccaact
tcaattccttgtgcatgcgctttccaagcgcatcatgaggttaacacacttactcatcat
gcttattga
DBGET
integrated database retrieval system
