Helianthus annuus (common sunflower): 110878694
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Entry
110878694 CDS
T05101
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110878694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110878694
03110 Chaperones and folding catalysts [BR:
han03110
]
110878694
03029 Mitochondrial biogenesis [BR:
han03029
]
110878694
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110878694
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110878694
Messenger RNA biogenesis [BR:
han03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110878694
Chaperones and folding catalysts [BR:
han03110
]
Heat shock proteins
HSP60 / Chaperonin
110878694
Mitochondrial biogenesis [BR:
han03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110878694
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110878694
Exosomal proteins of other body fluids (saliva and urine)
110878694
Exosomal proteins of breast cancer cells
110878694
Exosomal proteins of colorectal cancer cells
110878694
Exosomal proteins of bladder cancer cells
110878694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110878694
NCBI-ProteinID:
XP_021982739
LinkDB
All DBs
Position
7:129661096..129665840
Genome browser
AA seq
590 aa
AA seq
DB search
MASANAISSPSIIYSPKQGGLRNGNGGVSQLRTGQTAKQSQSNRRFAVRAAAKEIAFDQS
SRAAMQAGIDKLADAVGLTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELPDPMQNAGAA
LIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVAFLIEELE
KRARPVKGRDDIKAIAAISAGNDNIIGTMIADAIDKVGSDGVLSIESSSSFETTVDVEEG
MEIDRGYISPQFVTNSEKLLVEFENARVLVTDQKISSIKDIIPLLEKITQLRAPLLIIAE
DVSGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEYQAKDMGLLVENT
SVEQLGTARKITISKDSTTIIADAASKDEIQSRIAQIKKELSETDSVYDSEKLAERIAKL
SGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSALVPAIKDR
LDDADEQIGADIIQKALVAPASLIAQNAGIEGEVVVEKVKASEWEMGYNAMADKYENMVE
AGVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKAKAPVAAAPQGLTV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgctaatgcaatctcttcaccttccatcatctactctccaaaacagggaggt
ttgagaaatggtaatggaggtgttagccagttgcgaaccggtcaaacggctaagcaatcg
caatcgaaccggcggtttgcggttcgagctgcggctaaggagatcgcgtttgaccagagt
tctagagcggctatgcaggctggtattgataagcttgcggatgctgttggtcttactctt
ggtcctagagggaggaatgttgtgttggacgaatatggtgcccccaaggtggttaacgat
ggtgttacaattgcccgagcaatcgagttacccgatcccatgcaaaacgccggtgctgca
cttatcagagaggttgcaagcaaaaccaatgactcagccggtgacggcacaacaaccgca
tccgttcttgctcgtgaaatcattaaacttggtctgttaagtgtaacatccggtgcgaac
ccggtttcagttaaaaaaggtattgacaagacggttgcttttttgattgaggagctggaa
aagagagctagacccgttaaaggccgtgatgatatcaaagccattgcggcaatttctgct
ggaaatgataacattattggaaccatgattgctgatgctatcgacaaggtgggatcggac
ggtgtgttatccatcgaatcatcgtcttcgttcgagacaaccgttgacgttgaagaagga
atggagattgatagaggatatatctccccgcaatttgtcaccaactccgagaaattatta
gtcgagttcgagaatgctagagtgctcgtcaccgaccaaaagatatcttctattaaagac
attattcctttactggaaaagatcactcagttaagagctccgttgctgattattgcggag
gatgttagtggggaagcattggctactctcgttgtgaacaaattacgcggtatccttaac
gttgctgctattaaagcaccgggtttcggtgagagaagaaaagcccttcttcaagatatt
gctattatgacaggagccgaataccaagcgaaagacatgggtctgctggttgaaaacaca
tccgtcgagcagctcggtaccgccagaaaaatcacaatcagcaaagactcaaccaccatc
atcgccgacgctgcatcaaaagacgaaatccagtctagaatcgcgcagatcaagaaagaa
ctttccgagacagattctgtctacgactccgagaaactcgccgaacgaatcgccaagctg
tcaggcggtgttgccgttataaaggtcggtgccgcaaccgaaactgaattagaagaccgc
aagcttcgtatcgaggatgcgaaaaacgcaacatttgccgccatagaagaaggcatagta
cccggtggtggcgcggcacttgtccatttatcggcattagttcctgctattaaagacagg
cttgatgacgcggatgaacaaataggtgcggatattattcaaaaggcgttggtggcaccg
gcgtcgttgatagcgcaaaatgcgggaatcgagggtgaggtggttgtggagaaggtgaag
gcgagcgaatgggagatggggtacaatgcaatggcggataagtatgagaatatggtggag
gctggagttattgatcccgcgaaggtgacgagatgtgcgttgcagaactcggcttccgtt
gcgggaatggtgttgaccacgcaggctattgtggttgagaagccgaaagctaaggcacct
gtggctgcggcaccccaaggtctcactgtatga
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