Helianthus annuus (common sunflower): 110878710
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Entry
110878710 CDS
T05101
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110878710
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110878710
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
110878710
NCBI-ProteinID:
XP_035833492
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Position
9:complement(132425597..132435492)
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AA seq
675 aa
AA seq
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MGKMKDMIFVTKILVVILLHFVISTGASTSSINTKRPLKNHSSVSVLYPPVQLHKYDDHV
VVDNGIFSITIASPEGIVTRINYNGIDNILNDRNENSDRGYWDVNWSDPSDLKDGHLDKL
TGKHLDVIVNNENQVELSFKRPWTFAQEKNQVSLNIDKRFVVLRGLSGFYSYGIFERLRG
WPDVDIYQGRIVFKLQEKLFRYMAVSDERQRLMPTFEDREKGKPLDFPEAVLLTHPSNSR
LQGEVDDKYQYSTENKDNRVHGWICSDPPVGFWMITPSNEFRNGGPVKQDLTSHAGPVAL
SMFFSTHYAGPDLGMKFRDGEPWKKVFGPVFIYLNSVTTEESPLSLWDDAKEEMLVQTNS
WPYHFPNSSDYPRAYQRGLVTGQLVVRDVGLAFANSAFVGLAPPGALGSWQEESKGYQFW
TQTDEKGYFEIKNVRPGYYHLYAWVPGYIGEYMYQSIIYVLKGSKIRMGLLVHKPPRNGP
TVWEIGVPDRTAAEFYVPPPNPTLMNQLYASQRTDSFRQYGLWDRYTDLYPDKDLVYTVG
VNNYQTDWFFAHVNRHVGNKTYVSTTWTVLFDLEDVITGNYTIQLALASATNAEVQIRIN
GVGDASLVFTTKLIGKDNAIARHGIHGLYWLYSITVVHSHLRAGKNALYLKQTRGSYPFS
GVMYDYIRLERPSRY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagatgaaggatatgatatttgtgacaaagatattggttgttattcttctccac
ttcgtcatctctactggtgcttccacaagctcaatcaatacaaaaaggccgttaaagaac
cactcgagtgtttcggttttataccctccagtgcaattgcataagtacgatgatcatgta
gtcgtagacaacggcatctttagcatcacaatcgcaagtccagaaggcatagtcacccgc
atcaactataatggaatcgacaatatactaaacgatcgtaacgaaaactcagatcgcgga
tattgggatgtaaattggagtgatccatcggatctgaaggatggtcatttggataagctt
acgggcaaacacttagatgttatagttaacaacgaaaaccaagttgaactgtcattcaaa
agaccttggacatttgcccaagaaaagaatcaagtttccttaaatatcgacaaaaggttt
gttgtcttgcgggggttgagtggtttctactcgtatgggattttcgaacgtttaagaggg
tggcctgatgttgatatctaccaaggccggatcgtattcaagctacaggaaaaattgttt
cgatacatggcggtttcggatgaaagacaacggctcatgccaacgtttgaagatcgcgaa
aagggtaaacccctcgattttccagaagctgttcttttgactcatccttcaaattctcgt
cttcagggcgaggtagatgacaagtaccaatactcgactgaaaacaaagataatcgggtt
catggttggatatgctcagatccgccagtcggattttggatgatcactcctagtaatgag
tttcgtaatggtggcccggtcaagcaagacctaacctctcatgctggtcctgttgctctc
tccatgttttttagtacccattatgcggggcctgatttaggaatgaaatttcgagatggt
gaaccatggaaaaaggttttcggacccgtgtttatatatctgaactcggttacaacagaa
gaaagtcccctttccctttgggatgatgccaaagaagagatgctcgtgcaaaccaatagt
tggccgtaccatttccccaactcctcagattaccctcgtgcctatcaacgcggtctagta
acgggccagctggtggttcgagacgtggggttggcatttgccaactctgcgtttgttggc
ttggctcctcctggtgcacttggatcatggcaagaagaaagtaagggttatcagttttgg
acacaaaccgacgaaaaaggttacttcgagatcaagaatgtccggcctggttactatcat
ttgtatgcttgggttcccgggtacattggcgagtacatgtaccaatccattatttatgtc
ctaaaaggaagcaagatcagaatgggcctgcttgtacacaaaccaccaagaaatggccct
acagtttgggagattggtgtcccagatcgcaccgctgccgagttctacgtgcctccaccg
aacccaaccctcatgaaccagttatacgccagccaaagaaccgattcgtttaggcaatat
ggtttgtgggataggtacactgatctgtatccagataaagatttggtctacaccgttggc
gttaacaattatcaaacggattggttttttgctcatgtcaaccggcatgtaggaaataag
acctatgtttcgactacctggactgttttatttgatcttgaagatgtaattaccggaaat
tatacaatacaactggcattggcatcagcaacaaatgcagaagtgcaaataagaatcaat
ggcgtaggagatgcgtcgcttgtctttacaacaaagttaatcgggaaggataacgcaatt
gcacgacatgggattcatggactgtactggttgtatagcatcactgttgtgcattcgcat
ctacgagccggaaagaatgcattgtatttaaaacaaactagaggttcatatccttttagc
ggagtcatgtatgactatatccgattagaaagaccctctcgttattaa
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