Helianthus annuus (common sunflower): 110878799
Help
Entry
110878799 CDS
T05101
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110878799
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110878799
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110878799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_4
DUF3487
AF_0924
YitT_membrane
Motif
Other DBs
NCBI-GeneID:
110878799
NCBI-ProteinID:
XP_021982855
LinkDB
All DBs
Position
9:complement(135649174..135654770)
Genome browser
AA seq
435 aa
AA seq
DB search
MLNHWIFSCFFCFTASCVFANVLLLGNNLTLSFEDIEANFAPPVKGSGECGTLFLAEPLD
ACAPLTNKLIKESETQPFVLIVRGVCSFEDKVRRAQVAGFKAAIIYNNDDSDLVAMAGTG
TGIKIHAVFVSKSSGLKLSTYAGTSDMEVWIIPSFVNSAWSIMAISFISLLAMSAVLATC
FFVRRHRIRRGRPQAPRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSATCAICLEDYNVG
DKLRILPCRHKFHTICVDAWLTSWRTFCPVCKRDARTANGEPPASERTPLLSSNPGSMAS
LSSAYSSSYASSSQAIQIGQSQTSRTNIHSVSSTPYSRHQSPSPYVTPSRSSLDVRNIAS
SSHRSRASYLRSSNSLGYPSLSPLNTRHLSSYYPSPGNASSSYIWSSSQQPHPLRHSDSV
ASFSPYASAHSLPEC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatcattggatcttctcctgctttttctgtttcactgcttcatgtgtgtttgct
aatgttcttttgttggggaataatcttactttgtcttttgaggatatagaagctaacttt
gctccaccggtgaaagggtctggggaatgtggaacactgtttctagcggagccgttggat
gcgtgtgccccgttgactaataagttgatcaaagaaagcgaaacacagccgtttgtgtta
atagttagaggtgtatgtagctttgaggataaagttcgaagagcgcaggttgcaggattc
aaggcggcgattatttataataatgatgatagtgatctggttgcaatggcagggactgga
acgggtataaagatacatgcagtatttgtttcaaaatcatcaggcttaaaactcagcacg
tatgcgggtacaagcgatatggaagtatggattattccaagctttgtgaactcagcatgg
tcaatcatggcaatatcttttatttcgttgctggctatgtcagctgtgctggcaacctgt
ttctttgtgcgtaggcatcggataagacgaggccgccctcaagctcctcgtgttcgcgaa
ttccacgggatgagtagccgcttagtcaaagctatgcccagcctaatatttaccgctgtt
ttagaagataattgcacttcagctacttgtgctatctgtcttgaagattataatgttggg
gataaacttagaattcttccatgcagacacaaatttcatacgatttgcgtggacgcgtgg
ctgacttcgtggagaacattttgccccgtttgcaagcgcgatgcaaggacggccaacggt
gagccaccagcctcagaacgcacaccgttactttcatcgaatccaggttccatggcttca
ttatcttctgcatattcatcctcatacgcgtcatcatcacaagcaatacaaataggtcaa
agtcaaacatcacgtactaacattcattccgtctcaagcactccttacagccgtcaccaa
tccccttccccttatgttactccttcaagaagctcattagacgttagaaacattgcatca
tcttcacatagatcccgggcctcttatttgagatcatcaaactcgttggggtacccttct
ttatcgcctctaaatacacgacacctgtcatcatattatcccagtccaggaaacgcatca
tcgagttatatatggtcgtctagtcagcagccgcaccctttgcgccatagtgattccgtt
gctagcttttctccctatgcctcggctcattcccttccagaatgttag
DBGET
integrated database retrieval system
