KEGG   Helianthus annuus (common sunflower): 110878945
Entry
110878945         CDS       T05101                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110878945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110878945
Spliceosome [BR:han03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110878945
 Complex B
    110878945
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 110878945
NCBI-ProteinID: XP_021983035
LinkDB
Position
9:138468733..138474072
AA seq 585 aa
MTDYEEIYEGNGEDVQTFAAGDSSPPAAANGGGATEEFSDSKSQRGSRDYERESSKSRSK
DRERGRDKDSDRDRERDRDKDRERSRGRDRERSRDRDREKSRDRDRERDRDRHRDRHRER
SERRERGGDRDDDDYHRSRDYDRRRDRDDRRSRHRSRSRSRAKSEHRSRSRSRSRSKSSK
RVSGFDMAPPASAILAGAAAVTAGQVPGPTPAIPGMFQNMFPLASGQFGGLPVMPVQAMT
QQATRHARRVYVGGLSPTANEQTVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFV
EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLNPGS
AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLS
VTDIACAALNGIKMGDKTLTVRRANQGQIQPKPEQESVLLHAQQQIALQRMMLQPGAIGT
PPTRVLSLTQVVTEEELINDEDYEDILEDMKIECGKFGSLFNVVIPRPNPNGEPVAGVGK
VFLEYADTESSTKARAGLNGRKFGGNQVVASFYPENKFNQGEYDG
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgacggattacgaagaaatatacgaaggtaacggagaagatgttcaaaccttcgccgct
ggagattcttcaccaccggccgctgctaacggcggcggcgccaccgaagagtttagtgat
tccaagtcacagcgtggttctcgtgactatgaaagagagtcctcaaaaagcaggtcaaag
gacagggagagagggcgtgataaagacagtgatagggacagggagagggacagagacaaa
gatagggaaagaagcagaggtagagacagggaaagaagtagagaccgggacagggaaaaa
agccgagaccgggacagggaaagagatcgtgatcgacatagggaccgtcacagggaacgg
agtgagagaagggaaaggggaggagatagagatgacgatgactatcacaggagtcgcgat
tatgacaggcggagagatagagatgatagacgtagtagacatagatcccgttctcgctca
agagctaaatctgaacatagatcaaggtcgcggtctcgttcacgctccaaaagcagcaaa
agagttagtggctttgatatggcccctccagcttctgcaatcttggctggtgctgctgct
gttaccgcaggtcaggttcctgggcccaccccagccattcctggaatgtttcagaacatg
tttccgttggcgagtggccagtttggaggtcttcctgttatgccagttcaagcaatgact
cagcaggccacgagacacgcaaggcgggtttatgttggtggactttcaccaactgctaat
gaacagactgtggcaacctttttcagccatgttatgtctgcaattggtggaaatactgcg
ggtccaggtgatgctgttgtcaatgtatatattaatcatgaaaagaagtttgcttttgtg
gagatgagatccgtcgaggaggccagtaatgcaatggccttggatggcattatatttgag
ggtgcgcctgtgaaggttaggagaccaagtgattacaatccctcactagctgctactctt
ggtccaagtcaacctaatcctaacctaaatctgggtgctgttgggctaaaccctggttca
gctggtgggctcgagggccctgaccgcatctttgtcggtgggcttccttactatttcact
gaggctcaggttagggagctactggagtcttttggggctcttcgaggatttgatcttgtc
aaagacagagaaacgggcaactcaaaaggttatgcattttgtgtatatcaagatttatct
gtcaccgatattgcttgtgcagctcttaatggtatcaaaatgggtgacaaaaccctcacg
gttagacgggctaaccaaggtcaaattcaacccaagcctgaacaagaaagcgtactctta
catgcgcaacaacaaatcgcattgcagagaatgatgttgcaacctggggcaattggcaca
cctcctaccagggttctatctttgacacaagtggtaactgaagaagagctgataaacgat
gaggattatgaagatatcttggaagacatgaaaatagaatgtggaaaattcggtagttta
ttcaacgtggtgatcccacgcccaaatcctaacggtgaacctgtagcaggagttggcaag
gttttcttggagtatgcagacacagaaagttcaacgaaagctcgggcaggattgaatgga
aggaagtttggcgggaatcaagtggtggcgagtttttacccggagaataagttcaatcaa
ggagagtatgatggataa

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