Helianthus annuus (common sunflower): 110879091
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Entry
110879091 CDS
T05101
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110879091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110879091
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110879091
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_6
F-box-like
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
110879091
NCBI-ProteinID:
XP_021983188
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All DBs
Position
15:71075739..71079383
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AA seq
583 aa
AA seq
DB search
MDPAATGVTVAGNGADPAKTTTFPEEFLKRTFSLINSDKDRNSVSLVCKDWYNVERMSRR
HVSIRNCYSVSPEIVTARFPAIRSVTLKGKPRFSDFNLVPDDWGADVQPWLNVFATAYPF
LEELRLKRMAVSDESLEFLALNFDDFKALSMLSCEGFSTLGLEAIATHCKSLTELDIQEN
GIDDLGGDWLSFFPENLTSLEVLNFSTLTSEVSFDALESLVSRCKSLRVLKVNRKINLEQ
LGKLLVLAPQLIELGTGTFLEELMSGSVNGLENAFSKCGNLVTLSGFWDATLLHLPVVYP
VCGNLTFLNLSYANIGPDELEQILSRSKRLVRLWVVDTVGDKGLEAVGSHCPLLEELRVF
PVDPFDQQLGVTESGLVAVSKGCPKLHYILYFCQRMTNAAVITVAQNCPNFTHFRLCIMN
PSEPDYLTNEPMDEAFGAIVKTCTKLQRLSVSGLLTDLAFEYIGKYAKNLETLSVAFAGD
SDLGMEYVMRGCPKLKRVEIRDCPFGDSALLSGLTQYESMRSLWMSDCNVTMDGCKKLAE
EMSRLNVEVIKDEGGDDRLANKVYVYRTVAGPRKDAPPFVVTL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatccggctgccactggagtcaccgtcgccggaaacggtgcagatccagccaaaacg
acgacgtttccagaagaatttctaaaacgaacattttcgttgataaactccgataaggac
cgtaactcggtgtcactcgtatgcaaggactggtacaacgtggagcgaatgagcaggcgc
cacgtgtcaatccggaactgctactccgtttcgccggagattgtaaccgctaggtttccg
gcaatccggagcgtgacgctgaaaggtaaaccgaggttttcggatttcaatctggtgccg
gacgattggggagcggatgtgcaaccgtggctgaatgttttcgcgactgcgtatccgttc
ctggaggagcttaggttgaagcgaatggcggttagtgatgagagtttggagtttttggct
cttaattttgatgattttaaagctttgtctatgttgagttgtgagggatttagtactctt
ggattggaagctattgctactcattgcaaaagcttgacagaactagacatacaagagaat
gggattgatgatcttggtggagactggttaagtttcttcccagaaaacttaacctcgtta
gaagttctcaatttctcaaccttgactagtgaagtcagttttgatgctctggagagcctc
gtttctagatgcaaatcgttacgagttttgaaagttaatcgtaaaataaatttggagcaa
ttgggaaagcttcttgtgcttgcaccgcagttgattgagcttggtactggtacgttcttg
gaagaactcatgtctggttcagtcaacgggcttgaaaacgctttcagtaaatgcggaaat
cttgttacgctttcgggtttttgggatgctactttgcttcatctaccggttgtatatcct
gtgtgtggtaatttgacgtttttgaatctgagttatgcaaatatcgggcctgatgaactt
gaacagattcttagtcgatccaagcggctagttcgcctttgggttgtggatacggtaggg
gacaagggtttagaagcagttgggtcccactgcccgttgctagaagagcttcgagtcttc
ccggttgaccctttcgaccaacaacttggtgtgaccgagtcgggtcttgtggcggtatct
aaaggctgtccgaagctacattacatactctacttctgccaaagaatgacaaatgctgct
gtgatcacggttgcccaaaattgcccgaatttcactcacttccgtctttgcataatgaac
ccgagtgaaccagattacctaactaacgagcccatggacgaggcctttggtgccattgtg
aaaacatgtaccaagctacaacggctttcggtttctggcctgttaaccgacctggctttc
gagtatatcgggaaatacgcgaaaaacttggagacactatccgtagcttttgcaggcgat
agtgatttggggatggagtatgtgatgagaggctgcccgaaactaaaaagagtcgagata
cgagactgcccgtttggagattctgctttgctttcgggtttgacccaatacgagtcaatg
cgatctttatggatgtcagattgtaacgtgactatggacgggtgtaagaagttggctgaa
gagatgagtaggttgaatgttgaggtgatcaaagatgaaggtggtgatgataggcttgct
aataaggtttatgtgtatcgaaccgttgctggaccgcgaaaggatgcaccaccttttgtt
gtgaccctttag
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