Helianthus annuus (common sunflower): 110879316
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Entry
110879316 CDS
T05101
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03430
Mismatch repair
han03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110879316
03460 Fanconi anemia pathway
110879316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110879316
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110879316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110879316
NCBI-ProteinID:
XP_021983451
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Position
9:162444875..162453622
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AA seq
723 aa
AA seq
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MEFETREPPSPPPHPMETDTLDPPPSQDPPRIHRLDESVVNRIAAGEVIQRPVSAVKELI
ENSLDAGSTSINVSVKDGGLKFIQVSDDGHGIRYEDLPILCERHTTSKLSAFEDLQSIKS
MGFRGEALASMTYVAHVTVTTITSGQLHGYRVSYRDGVMEHEPRACAAVKGTQIVIENLF
YNMIARRKSLQSSADDYPKIIDLLSRFAIHHKNVSFSCKKHGASKADVHSVAVSSRLDAI
RSVYGASVARSLIEIEASDANSSSSVFEMNGYISDFNYSAKKTTMILYINERLVECTALK
RAIEIVYAATLPKASKPFVYMSIILPPEHVDVNVHPTKREVSLLNQEVIVEKIQSTIESK
LRNFNDSSTYQEHVAVDSSPSSKVAANKASPINTSTPGSQKVYPYKMVRTDLQDPSGRLH
AYMQVKPSRQLEKNCGLNSLRSSIKQRRNPKETADLTSVQELINEFEHGCHSGLLDIVRN
CTYVGMADDVFALLQHNTNLYLANVVNLSKELMYQLVLQRFGYFNAIQLSDPAPLQELIM
LALREEDPDSEGTENDDLKEKIADMNMKLLTEKAEMLDEYFGIHVDPQGNLSRLPVILDQ
HTPDMDRVPEFVLCLGNDVAWNDEKICFQTIAAALGNFYAMHPPLLPNPSGDNSDFYKRD
VEGVDDELISEAENAWAQREWSIQHVLFPSMRLFFKPPTSMAANGTFVQVASLEKLYRVF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaaacgagggaaccaccatcaccaccaccacaccctatggaaacagacaca
ctcgatcctcctccatcacaagatccaccgaggatccaccgtctcgacgagtccgtcgtc
aaccgtatcgctgccggtgaggtcatccaacgccccgtatccgccgtcaaggagctcatc
gaaaacagcctcgatgccggttctacctccatcaacgtctctgttaaggacggaggcctc
aaattcatccaagtctccgacgatggccacggaatccgctatgaggatttaccgattctg
tgtgagaggcatacgacatcgaagctttcggcatttgaagatttgcagtcgattaagtct
atggggtttagaggagaagccctagcaagcatgacttatgttgctcatgttacagtcacc
actataactagtggtcagttgcatggttatagggtatcgtatagagatggcgtgatggag
catgaacctagggcttgtgctgctgtgaaggggactcagatagtgattgagaatttattc
tataacatgattgcgcgaaggaaatctcttcagagctctgctgatgattatccaaaaatt
atagatctgctaagtcggtttgcgatccatcacaaaaacgtgagcttctcatgcaaaaag
catggtgcatctaaagctgatgttcactcagttgctgtgtcttcaaggcttgatgcaatc
agatctgtttatggggcctcagttgctcgtagtctgatagaaattgaagcttcagatgct
aattcttctagttcagtttttgaaatgaatggttatatatccgatttcaattactccgca
aagaagactaccatgattctctatatcaatgaaagattagttgagtgtactgctctgaag
agggcaattgaaattgtatatgctgcaactctgcccaaagcatcaaagcctttcgtatat
atgtcaattatcttacctcctgagcatgttgatgttaatgtgcatcccacaaagagagag
gtgagccttttgaaccaggaggtcattgttgagaaaatacaatcaacaatagaatcgaag
ttaagaaatttcaatgactcgagcacgtatcaagaacatgtagcagtggatagctctcca
tccagtaaagtagctgcaaacaaagcttctcctataaacacatcaactcccgggtcccaa
aaagtatatccatataaaatggtgcggacggatttacaggatccttctggaaggttgcat
gcctacatgcaagtaaagccttctaggcaacttgaaaaaaactgtggtttgaattcattg
aggtcttcaatcaagcaaaggagaaatccgaaagaaactgctgatcttacaagtgttcag
gagcttatcaatgaatttgaacatggttgccattctggtcttttggacattgtaaggaac
tgcacatatgttggaatggctgatgatgtttttgctctccttcagcataatactaatctg
tatcttgctaatgttgtaaatttgagcaaagaactcatgtatcaactggttctacaaaga
tttggttactttaatgcaatacaattaagtgatccggctccattgcaagaattaatcatg
ttggcattgagggaagaggatccagattcagaaggcactgaaaacgatgacttaaaagaa
aagattgctgatatgaacatgaagttactcacagaaaaggctgaaatgcttgatgaatat
ttcggcatccatgtggacccacaaggcaatttatcaagacttcctgtcatacttgaccag
cacacacctgacatggaccgcgttccggaatttgttttatgtctgggaaatgatgtggcg
tggaatgatgagaaaatttgctttcaaacaatagctgctgctctcgggaacttttatgct
atgcatccacctctactgccaaatccatcaggtgataactcggacttttacaagagagat
gttgaaggagttgatgacgagttaatatcagaagctgagaacgcgtgggcccagcgagaa
tggtcaatacagcatgttctatttccttctatgcgacttttctttaagcccccaacttca
atggctgcaaatggaacatttgtgcaggtagcatctctggagaagttataccgggttttt
gaaagatgctag
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