Helianthus annuus (common sunflower): 110879333
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Entry
110879333 CDS
T05101
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110879333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110879333
03036 Chromosome and associated proteins [BR:
han03036
]
110879333
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110879333
Coactivators
SAGA/TFTC/STAGA complex
110879333
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110879333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
110879333
NCBI-ProteinID:
XP_021983465
LinkDB
All DBs
Position
9:164059271..164063070
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AA seq
548 aa
AA seq
DB search
MHPPMNSFITKFLDEDEDETMHSAADVEAITAALNRDIEGLGGEAANAMNQRAGTQVPFG
LLLPEIQSQLNKDRAMQLQDLYNRLKSNRIDKNEFVRLMRTIVGEHMIKMALYKLQQRGQ
LSAKLNAPNSSAYVATSSIHRSSDPNTPPMENKSQQTRLLEHRSDSHGVQHMGFPQSSFS
AYGHPSGNYHTGASPNTNMSSLSLQMSHGPVHPIRMQGGGPTHFTSNLPHVNLSSAAGSN
AKTPPKKSTVAHKKPLEVPHVSSLSKKQKVCGAFSDQSIEQFNDVTAVSGVNLREEEEQL
FFGFKEESHVSEATRKLVQEEEERLFLHKVPLQKKVAEIMAKCGVKNKSNDVERCMSHCV
EERIHGLITNLIRLSKQRVDMEKPRHRTVITSDIRQQIMLLNQKAREEWEETHADADKLK
RAAEVNKEQTTAANVAARAAVGGDDMLLKWQLKAERARQKQESGSNAAAASHPSLGVGLG
LGLGPKLVPTSERNSTKDNPDTERSSGPVTANCGPLPRTVSVKDVMSVLTREIQMSRSTL
IHHLYEQV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgccaatgaattctttcataacgaaatttcttgacgaagacgaggacgaaaca
atgcattcagcggctgacgtggaggcaattaccgctgccctaaacagagatattgaaggc
cttggaggggaagcggctaatgcgatgaatcagcgggctggcacgcaggtgccatttggt
cttttgctccctgagatacaatcacaacttaataaagacagggctatgcaactccaggat
ctgtataatcgattgaagagtaataggattgacaaaaacgaatttgttcggctcatgcgg
actattgtaggggaacatatgattaagatggcactctacaagttacaacaacgtgggcag
ctttctgctaaactaaatgccccaaattcatctgcgtatgttgccacatcatctatccat
cgttcatcggatccaaacactccacctatggaaaacaaatctcagcaaacacgattgttg
gaacaccgatcagattcacatggagtacaacatatgggctttccgcaatcatctttttct
gcgtatggacatcctagtggtaattatcacacgggtgctagtccaaatacgaatatgtcc
tcactgtctttacaaatgagccacggtccggttcatccaatcagaatgcaggggggtggt
cccactcatttcacaagtaatttaccacatgtaaacttgtcatctgcggctggaagtaat
gcaaagactcccccgaaaaagtcaactgttgcccataaaaaaccattggaagtaccacat
gtttcttcactaagtaagaagcaaaaagtgtgtggtgcattttcggatcaaagtattgag
caatttaacgatgtgactgctgtcagtggggtgaatttacgggaagaggaggaacaacta
tttttcggattcaaggaagagagtcacgtttcagaagctactagaaagcttgttcaagaa
gaagaagaaagactgtttttacataaagttccactccagaagaaagtggcggaaatcatg
gcaaagtgtggtgtcaagaacaaaagcaatgatgtggagcggtgcatgtcacactgtgta
gaggaaagaattcatggattgattaccaacctcattagactttcgaaacagagggtcgat
atggagaagccaagacaccgaactgtaatcacatcagacattcgacaacaaatcatgtta
ttaaatcaaaaggctcgggaagaatgggaggaaacacacgctgatgctgataaactcaaa
agagctgctgaggtaaacaaagagcagaccacagctgcaaatgttgctgcacgggcggct
gtaggaggagatgacatgctgttaaaatggcaactaaaggctgagcgggcccgtcagaaa
caagaaagtgggtctaatgcagcggctgcttctcacccaagtttaggtgttgggcttggg
cttgggcttgggcctaagctcgtgccaacttctgagagaaactctactaaagataatcca
gatacagagcggagttcgggtcctgtcactgctaattgtggtccattacctcgtactgtt
tcggtgaaggatgtaatgtctgttctaacaagggagattcagatgtcaagatccacacta
atacatcacctctatgaacaagtctaa
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