Helianthus annuus (common sunflower): 110879938
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Entry
110879938 CDS
T05101
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110879938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110879938
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110879938
FA (Fanconi anemia) pathway
110879938
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
110879938
NCBI-ProteinID:
XP_021984181
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Position
9:complement(181123533..181127186)
Genome browser
AA seq
677 aa
AA seq
DB search
MSSRRRLRIICSSDEEDDDDIQQPQPPLQQQQHHDIESETPNPSISNPNNPPHPIQIELS
DEEFIDATEDSPNSPPLPSSPPPQHHQPVYTSEYSTTSTVGTNQASDSPIGRVLGELGLR
LKGEWLDSCLRGLETAVPGFSSLDATQKAKLCFDKFLNADMNYCGAGSLPNNVHQMHLVD
LPGPFVLQVDEIVNISQHLRERYKKANAGLKRCLKLSMTDGVQRVFGMEYQPIKDLDVLA
PAGLKVAISNVTVRHGLIMLVPEVFQVLGGIVEELDAARQRVVTEVNKPPRGRRTRTGVV
PPLATRATRAAWPANDPVSQSTTPMQGDNTVPVNGRASSNSGVPVNGRASSNPTVPVSVR
GSSNPSVPGDFRVSSNPAVPVGVRASSNSAVHLSVRASSNSSIPVSGRMSNSAVPVSGRV
PNFAGPNEHQPPRTGVESSVSAHRMNTEPFPSTAATENSVNMNSENATFTVPIIRETVET
TPFRVREETTAPVHLASPVAFSDDDEDVHLVATSREKPFTYLAQLSVKWAESKDKSSHVE
GKIKCFVTGVKVFQYKKRSTYELQVYVDDGSLISEILIDHNIVQKKIGYSPDETNTALSS
SDQSRVQDMKNIMKQFQVYLVNFEGIMVVRINEASSLPVAIEMQQGCSLSDAWSLLGRLK
SSNDDQRSQLDPIILSP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagaaggcgtcttcgaataatctgttcatccgacgaagaagacgacgacgac
atacaacaaccacaaccacctcttcaacaacaacaacatcatgatatcgaatccgaaacc
cccaatccctcaatttctaaccctaataacccacctcatcccatccaaatcgaactatcc
gacgaagaattcatcgacgcaaccgaagattctcccaattcaccgccacttccatcatca
cctccgcctcaacaccaccagcctgtttatacttcagaatattctactacaagcactgtt
ggtacgaatcaagcttctgacagtcctattggtagggttttgggagaattagggttgaga
ttgaagggtgaatggttggattcttgtcttcgtggcctcgagaccgcggtccctggattc
tccagccttgatgctacacaaaaggcaaagctttgttttgataagtttttgaatgctgat
atgaactactgcggtgctggatcgcttccgaataatgtgcatcaaatgcaccttgttgat
cttcctggaccgtttgtgttgcaggttgatgagatagtaaatattagtcaacatcttcga
gagcgttacaagaaggcaaatgctggcttaaagagatgcctaaaactatcaatgaccgat
ggtgttcaacgagtttttggcatggaatatcagcctattaaagatctagacgttctagct
cctgcaggactgaaggttgctatttctaacgtaactgtaaggcatgggctcataatgctg
gttccagaagtttttcaagttctaggaggtatagttgaggagctagatgcagcacgacaa
agagttgttactgaagttaataagcctccaaggggaagaaggacaagaacaggagttgtc
ccccctttagcaactagagctactcgtgcagcatggcctgctaatgatcccgtttctcaa
agtacaactccaatgcagggggataacacagttcccgttaatggtagagcgtcatcaaat
tctggagttcccgttaatggtagagcgtcatcaaatcctacagttcccgttagcgttaga
gggtcatcaaatccttcagttcctggtgattttagagtgtcatcaaatcctgcagttcct
gttggcgttagagcgtcatcaaattctgcagttcaccttagcgttagagcgtcatcaaat
tcttcaattcctgttagtggtagaatgtcaaattctgcagttcctgttagtggtagagtg
ccaaattttgcaggtccaaatgaacatcagccaccaagaaccggagtagaatcttctgtt
tccgcccataggatgaataccgaaccgtttccatctacggctgcaacggaaaattctgtt
aatatgaactcagaaaatgctacttttactgttcccataattagggaaactgtggaaaca
acgccgtttagggttcgagaagaaaccaccgctcccgtccacctggcatcacctgtggcg
ttttccgatgacgacgaagatgtccacttggtggctacaagtagggaaaagccgttcaca
tacttggcccaattgtcagttaaatgggctgaatcgaaagataaatcatctcatgttgag
ggcaaaattaagtgttttgtgactggagttaaggtattccagtataagaaaaggagcaca
tatgagcttcaagtatatgtagatgatggtagtttgatatccgagatccttattgatcac
aatattgtacagaaaaagataggctattctccggatgagacaaacaccgcgttgtcttct
tcagatcagtctagggttcaagacatgaagaacataatgaaacagtttcaagtttattta
gtgaactttgagggaataatggttgtaaggataaatgaagcatcaagtcttccagttgca
atagaaatgcagcagggttgttctttatctgatgcatggtcccttcttggaagattgaag
tctagtaacgatgatcaacgatcacagttggatccaattattttatccccgtaa
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