Helianthus annuus (common sunflower): 110880173
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Entry
110880173 CDS
T05101
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110880173
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
110880173
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
110880173
Prokaryotic type
110880173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
110880173
NCBI-ProteinID:
XP_021984445
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All DBs
Position
9:185893753..185902153
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AA seq
927 aa
AA seq
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MNTMPQIPNLRLLFSTQNPSFLLSSLKPNQTLKFTHTIPPKPTKNLSFSYPLFTCLASRK
PSSKSFSSGSLKQSVSKEKKGVSSMEESKKLGISGGFNKKRAEGRDKSGPKDLKLKVRRL
NPVNTISYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIF
LSRVCSETAGGLPGLLLTLAGTGEEGLSVNVWGPSEFKYLVDAMKSFIPNAAMVHTHCFG
PSPTSNRVTLDNPERVNNQIKLIDDEVVKISAVLLRPETRGLKDASAIKSSDISVLYICE
LPEIRGKFDLEKARALGLKPGPKYRELQEGRSVKSDLKDIMVHPDDVLGPSVPGPIVLLV
DCPTLSHFQELLSIQSLDNYYADISEEKHNVVNCVIHLSPSSVVNSSDYQKWMSRFGEAE
HIIAGHQTKNIEIPILQSSARIAARLNYVCPQFFPAPGFWSLQQTNRSNEGADLKLCKTV
SAENLLKFHLRPYAQLGLDRSGIPTKAGPTEIINELISEIPEISDAAKQVLQLWDREEED
VGEGITSTESDKNVTEEPWLNQNILPRCLEDVTRENVEIVLLGTGSSQPSKYRNVSSIFI
DLFSKGSLLLDCGEGTLGQLKRRFGIEGADEAVKKLKCIWISHIHADHHTGLARILALRR
DLLKGLPHEPLVVVGPRQLKRFLDAYERLEDLDMQFLDCRHTTEASLASFESNDNKDENT
LFSKGSPMQSLWKKAVNTLDGNVSYPVMKNLKKVIGEAGLENVISVPVVHCPQAFGVVLK
GMDRVDSGGTIIPGWKVVYSGDTRPCPELVEASQGATVLIHEATFEDALVEEAIARNHST
TEEAIEVGNSAGAYRIILTHFSQRYPKIPVFDQSYMHKTCIAFDMMSVNFADLHVLPKVL
PHLKLLFKNEIVDESDDVEDAAVTLAA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaatgccccaaatcccaaacctccgcctccttttctccacccaaaacccctct
tttcttctttcttctcttaaacccaatcaaaccctcaaattcacccacaccatcccacca
aaacccaccaaaaatctttctttttcttaccctttattcacctgtctcgcttcaagaaaa
cccagttcaaaatctttcagttccgggtctttgaaacagagtgttagcaaggagaaaaaa
ggggtgtcttcaatggaagaaagcaagaagcttggaatcagtggtgggtttaacaagaaa
agggctgaaggtagagataagagtgggcctaaagatttgaaattgaaagttagaaggctt
aatcctgttaataccatatcttatgttcagattttaggaacaggtatggatactcaagac
acatcaccttcagtcttgctgttttttgataagcagaggtttatatttaatgctggagaa
ggtctgcaacgattttgtacggaacataagattaagttgtcgaagattgatcacatattt
ctttcacgcgtctgctccgaaaccgcgggtggattaccaggtcttttattgacgttggct
ggcactggtgaagaagggttatctgtaaatgtatggggaccgtcggaatttaagtattta
gttgacgcgatgaaatcgttcattccaaatgcagccatggttcacacgcattgcttcggt
ccatcaccgacatctaatagggttacattggataatcccgaaagagttaataaccaaatt
aaacttatcgatgatgaagttgttaaaatatcggctgttttgttgcgacctgaaacccgt
gggcttaaagacgcgtctgcaataaagtctagtgatatttccgttttatatatttgtgag
cttcctgaaattaggggtaagtttgaccttgaaaaggcccgagcactcggattgaaaccc
gggcctaaatatcgtgaactacaagaaggaagatccgtgaaatcggatttaaaagatatc
atggttcatcctgatgacgtacttggaccttcggtccccgggcctattgttctccttgta
gattgccctacactctctcattttcaagaactattatctatacaatcactagataattat
tacgctgatatttccgaggagaaacacaacgttgttaattgtgtaatccatttaagtcca
tcatcagtcgtaaactctagtgattatcaaaaatggatgtcacgatttggtgaggcagag
catattattgcaggacatcaaacgaagaatattgagataccgattttgcaatctagtgca
cgaatcgcagccagacttaattatgtatgtcctcagtttttcccggctccgggtttttgg
tctcttcaacaaacgaatcgttcaaatgagggtgctgacttaaagctttgcaagaccgtt
tctgctgaaaatctcctcaagtttcatttacgtccttatgcacaacttggactagacaga
tccggtataccaaccaaagcgggccccacggaaatcattaacgaactaatttccgagatt
cccgaaatatccgatgccgcgaaacaagttttgcagctttgggacagggaagaagaagat
gtgggtgaggggataacgtcaacggaaagtgacaagaatgtaaccgaagaaccttggtta
aatcaaaatattcttcctagatgtttggaggatgttacacgagaaaacgtcgagattgtt
cttttagggaccggttcatctcaaccgtcaaagtaccgtaatgttagttcgatcttcatc
gatcttttctctaaaggtagtttgttgttagattgtggtgaaggaacattgggtcagctg
aaaagaagatttggtattgaaggcgcggatgaagctgttaaaaaattaaaatgtatatgg
atttcacacatccatgcggatcaccatacgggtttagcaagaatacttgctctccgacgt
gacttgctgaaggggttacctcacgaaccgttagtcgttgtagggccgagacaacttaaa
cgattcctagatgcatatgaacgactcgaagatttagatatgcagtttctagattgtagg
catacaaccgaggcttcgttagcgtctttcgaatccaatgacaacaaagatgaaaatact
ttgttttctaaaggaagtccgatgcaaagcctttggaaaaaggcggttaatactttggac
ggtaacgtatcgtatccggttatgaagaatttgaagaaagtgatcggtgaagcgggtttg
gaaaacgtgattagtgttcctgttgtgcattgccctcaagcgtttggggtggttttgaaa
ggtatggatagagttgatagtggcgggacgataatacctgggtggaaggttgtttattcg
ggtgacactagaccgtgcccggagttagtagaagcttctcaaggggcaacggttctcatt
cacgaggcaacgtttgaggatgcgttagtggaggaagcaatagcaagaaaccacagtaca
accgaagaagccattgaagttgggaactccgcaggagcataccgaataattcttacacat
ttcagtcaaagatatcctaaaattccggtttttgatcaaagttacatgcataaaacatgc
attgcttttgatatgatgagcgtcaactttgcggatttacatgtgctgccaaaagtgctc
cctcaccttaaactcctgtttaagaatgagattgttgatgaatctgatgatgtcgaggat
gctgctgttacacttgctgcctga
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