Helianthus annuus (common sunflower): 110880220
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Entry
110880220 CDS
T05101
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110880220
03083 Polycomb repressive complex
110880220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110880220
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110880220
Histone modification proteins
HAT complexes
HATB complex
110880220
HDAC complexes
Sin3A-HDAC complex
110880220
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110880220
PRC2.2
110880220
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110880220
Heterochromatin formation proteins
Other heterochromatin formation proteins
110880220
Chromatin remodeling factors
NuRD complex
110880220
NuRF complex
110880220
NuRF complex (fruit fly)
110880220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_TEP1_C
Beta-prop_SPT8
WDR90_beta-prop_4th
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
110880220
NCBI-ProteinID:
XP_021984499
LinkDB
All DBs
Position
9:complement(187395713..187402291)
Genome browser
AA seq
459 aa
AA seq
DB search
MKERGGKGGSQPSVNERYTQWKSLVPVLYDWLANHNLLWPSLSCRWGPLLEQATYKNRQR
LYLSEQTDGSVPNTLVIANCEIVKPRVAAAEHIAQFNEEARSPFVKKFKTIIHPGEVNRI
RELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGATESHPDLILTGHQENAEFALAMSQ
SEPFVLSGGKDKSVVLWSIHDHISTLATDSGAGSNGGKSPKAGIDDKPPSESPKIQARGI
FQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHCVDWNP
IDENFILTGSADNTVRLFDRRNLTSNGVGAPVHIFNNHNAAVLCVQWSPDKSSIFGSSAE
DGVLNIWDHNKIGERSGPASKFAPGLLFRHSGHRDKVVDFHWNSHDPWTIVSVSDDGEST
GGGGTLQIWRMIDLIYRPQEEVIDELEKFKSHILTCSTP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcgaggcggtaaaggaggaagccagccgtcggtgaacgaacgctacacacag
tggaagtctctcgtccccgttctctacgactggctcgctaatcataacctcctttggccc
tctctctcatgccgatgggggccactgctagaacaagctacttacaagaatcgacaacga
ctctacctttcggaacagactgatggtagcgttccgaacacacttgtgattgcaaattgt
gagattgttaaaccaagagttgcagctgctgaacacatagcacagttcaatgaagaagca
cggtctccctttgttaagaagtttaaaaccattatccatcctggagaggtaaatcgcatc
agggagcttcctcagaacagcaaaatagtagccacacacacagacagtcctgatgttctt
atctgggatgttgaagctcagcccaatcgccatgctgtcttgggagccacagagtctcac
cctgatctgatcttgactggtcaccaagaaaatgcagagtttgctcttgctatgagccaa
agtgaaccctttgtactatctggaggcaaggataaatcagttgtactgtggagtattcat
gatcatatctccactttggcaacagattctggggccggatctaacggtggtaaaagccca
aaggctgggattgatgataaaccaccttctgagagtcctaaaatacaagcaagaggtatt
tttcaagggcatgaggatactgttgaggatgtacaattttgcccttctagtgcacaagaa
ttctgtagtgttggtgacgattcttgtcttattttatgggatgcaagaacagggtcttct
ccagttgtcaaggtcgagaaagctcataacgctgatctccattgtgttgattggaaccca
attgatgagaacttcattttaacagggtcggctgataacactgttcgtttgtttgatcgt
cgaaatctcacttctaatggggttggagcacccgtccacatatttaataaccacaatgct
gctgtcctttgcgtacagtggtctcctgacaaatcgtctatctttggaagttcagctgag
gatggtgtcttaaacatctgggatcacaataagattggtgaacgctctggcccagcctca
aagtttgcaccaggcttattgttccgtcactctgggcacagggataaggtggttgatttt
cactggaactcacatgatccatggacaattgtcagtgtctctgatgatggtgaaagtact
ggtggcggtggtacactacagatatggaggatgattgatttgatttaccgcccgcaagag
gaggttatcgacgagctggagaaattcaagtcgcacattctcacttgttcaaccccgtag
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