Helianthus annuus (common sunflower): 110881556
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Entry
110881556 CDS
T05101
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110881556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110881556
03009 Ribosome biogenesis [BR:
han03009
]
110881556
04131 Membrane trafficking [BR:
han04131
]
110881556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110881556
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110881556
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110881556
Membrane trafficking [BR:
han04131
]
SNARE
SNARE associated proteins
Others
110881556
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110881556
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110881556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
CDC48_2
AAA_22
AAA_5
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
Vps4_C
AAA_18
Parvo_NS1
ATPase_2
ABC_tran
Viral_helicase1
nSTAND_NTPase5
NB-ARC
AAA_7
AAA_lid_PRS2_C
TsaE
NACHT
IstB_IS21
Zeta_toxin
DUF815
AAA_24
ResIII
Motif
Other DBs
NCBI-GeneID:
110881556
NCBI-ProteinID:
XP_021985472
LinkDB
All DBs
Position
1:complement(140815659..140820257)
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AA seq
808 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAVNDDNSVVALHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDVYLKPYFLEAYRPVRKGDFFLVRGGMRAVEFKVIETDPAEYCV
VAPDTEIFCEGEPIRREDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALCT
ESALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSQGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYSI
FKSALRKSPVAKEVDLHALAKYTQGFSGADITEICQRAVKYAIRENIEKDIEREKRRSEN
PEAMEEDVEDEVPEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
TSGAAAGAGGSDPFAASAGAADDDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaagcggaatcatcggactctaagggcacaaagcgcgacttcagtacggcg
attcttgaacggaagaaggctgctaacaggctggttgttgatgaagctgttaatgatgat
aactctgttgttgcgttgcatcctgagaccatggaaaagcttcagctttttagaggagat
actattctgattaagggaaagaagcgtaaagacactatttgcattgctcttgctgatgac
acttgtgaagagccaaaaatcagaatgaacaaggttgtcagggctaacctacgtgtcagg
ctcggtgatgtggtctccgtccaccaatgccccgatgtcaagtacggcaaacgggtgcat
atccttccagttgacgatacgatcgaaggcgttactggcaatctcttcgatgtgtatcta
aaaccgtactttttggaagcataccggcccgtgaggaaaggcgactttttcctcgttagg
ggaggaatgcgagcggttgaattcaaagttattgaaacggatcctgcagaatactgtgtg
gttgcaccggataccgagatcttctgtgaaggtgagcctatcagaagggaggacgaagat
cgattggacgaaatcggttatgatgatgtcggtggggtccgcaaacagatggcgcaaatc
cgtgagctcgtggagttgccgttaagacacccgcagcttttcaagtcaatcggtgtcaaa
ccaccgaaaggaatccttctttatgggcctcctggatccggtaagactttgatagcccgg
gctgtcgcaaacgaaaccggtgcgttctttttctgtataaacgggcccgaaatcatgtcg
aagatggctggagaaagtgagagtaacctccgaaaagcgtttgaggaagccgagaagaac
gctccgtcgattatcttcatcgacgaaatcgattccatcgctccgaaaagagataaaaca
aacggagaagttgaacgaagaatcgtctcgcagcttttgactctaatggacgggttaaaa
tcacgtgctcacgttatcgttatgggcgcaaccaaccgtcccaacagcattgaccctgcg
ttgaggcgatttggccggtttgaccgcgaaatcgatatcggtgttcctgatgaagtcggt
cgtctcgaggtgctccgcattcataccaagaacatgaagttggcggaagacgtcgacttg
gaaaagatttcgaaagagacgcatgggtatgtcggtgctgacttggcggcgttgtgtacg
gagtcagctcttcagtgtattcgtgagaagatggatgtgattgatttggaagacgagtcg
attgacgctgagattcttaactcaatggcggttacgaatgagcactttcaaactgctctt
ggtacgagtaacccgtctgctcttcgtgaaacggttgtcgaagttcctaacgttagctgg
gaagatatcggtgggctcgaaaacgttaaacgagagctccaagagactgtgcaatatccg
gttgaacaccctgaaaaattcgagaaattcggtatgtcaccatctaaaggagttctgttt
tacgggccacccgggtgtggtaaaacgcttctagccaaggctatagccaatgaatgccaa
gctaacttcatcagcatcaagggtccagaattgctaaccatgtggttcggtgaaagtgaa
gctaatgttcgtgagatctttgataaggcccgtgggtccgccccttgtgttctgtttttc
gatgagctcgactccattgctacccagagaggaagtagtcaaggagatgcgggaggtgca
gctgatagggtgttgaatcaacttttgactgaaatggacgggatgtcagctaaaaagacg
gttttcattatcggtgcaactaaccgtcctgacatcatcgatccagctcttttgaggccc
ggtcgtcttgatcagttaatttacattcctctccctgacgaggaatcacgttactcgatc
tttaaatctgctttaaggaagtcacccgttgcgaaagaagttgatcttcacgcacttgct
aagtacactcagggattcagtggggctgacatcaccgaaatctgccagcgtgcagttaaa
tacgctatccgtgagaacattgagaaggatattgagagggagaaacggaggagtgagaac
ccggaggcgatggaggaggacgtggaggatgaggtgccggagatcaaggcggcgcatttt
gaagaatcgatgaagtttgcacgaaggagtgttagtgatgctgacattcgtaagtaccag
gcatttgctcagactctgcagcagtctagaggtttcgggtcggagtttaggttctctgag
actagcggtgcggcggctggtgccggtggctcagacccttttgctgcttctgctggtgcg
gctgatgatgatgatttatataactag
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