Helianthus annuus (common sunflower): 110882589
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Entry
110882589 CDS
T05101
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110882589
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110882589
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110882589
NCBI-ProteinID:
XP_035834540
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Position
10:complement(138791251..138803606)
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AA seq
433 aa
AA seq
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MGLCLYLTYASFTFMQIHFITLLLVLLTSSALSSTTSRISLVSTTIFDVVQYGAKGDGII
DDSPAFIAAWKAACQSTPNTTSILNIPVGRTYLLKPIAFSGPCKPSKIFVQVAGNIVGSN
NKTDWMSNHGDSWLLFSMVSGLTVSGNGQIDGQGPIWWENACIGTPSPGRTCHAPVALQF
KRCIGLRLSGLTHVNSPRVHITITTCNDVIVSNLHIIAPETSPNTDGIDISGSVNVNIRD
SIIATGDDCIAIGGGSSYIKISGIMCGPGHGISIGSLGHGGTDVVENVDVHNCTMIKTLT
GVRIKTYQGGTGYANKISFTGIKFDAVNNPIIIDQYYCPSHKGCLTSTSAVNLSDITYRG
ISGTSNTDNVINLSCSKTVACTNIVVDSVHIKSAIPGRKVYGSCINACGRATHVQPYLDC
LKPSTDLCNGPLS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggggctttgcttatacttaacttacgcatcattcacattcatgcagattcactttatc
acattacttttggtcttgctaacatcttctgctttaagttctactacttcaagaattagt
cttgtatcaaccactatttttgatgtggtccaatatggggctaaaggagatgggataatc
gacgactcaccggcttttatagcagcatggaaggcagcatgccagtcgacaccaaatact
acgagtatattaaatataccagtaggaaggacgtatttgttgaagccaattgctttcagt
ggtccatgcaagccctccaaaattttcgtccaggtggctggaaacattgttggttcgaac
aacaaaaccgattggatgagtaatcatggtgattcttggctcttgttttcaatggtgagt
ggtcttacagtaagtggaaatggccagatagatgggcaaggtcctatttggtgggaaaat
gcctgcattggtactccttcaccaggtagaacttgtcatgcaccagtggcattacaattt
aaaagatgcatcggcttgcgactcagtggtttaactcatgtaaacagcccgcgagtccat
atcacaataactacttgcaacgatgtcattgtatctaatttacatataatcgcccctgaa
acaagcccgaatactgatggcattgacatttcaggctccgtcaatgtcaacatacgtgac
tccattattgcaacaggggacgactgtattgctattggtggaggttcatcttatataaaa
atcagtggtatcatgtgtgggccaggccatggaatcagcattggatccttgggacatggt
ggaacagatgtggtggaaaatgtagatgtgcacaactgtaccatgataaaaaccctaact
ggagtaaggattaaaacttatcagggaggaactggatatgcaaacaagatctcatttaca
ggcatcaagtttgatgcagttaataaccctatcattatcgaccaatactattgtcccagt
cacaaaggttgcctaacctctacatcagctgtgaacttgagtgacataacatacagagga
atctccggaacatcaaatacggataacgtaataaatctaagctgcagtaaaactgttgca
tgcacaaatattgtggtggatagtgtgcatatcaagtcagcaattccaggaagaaaggtt
tatggcagctgtattaatgcttgtggaagagctacccatgttcagccttatttagattgt
ctaaaaccttcaactgacctttgtaatgggcctctgagctag
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