Helianthus annuus (common sunflower): 110883506
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Entry
110883506 CDS
T05101
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110883506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110883506
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110883506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110883506
NCBI-ProteinID:
XP_021986932
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All DBs
Position
1:145372025..145378514
Genome browser
AA seq
243 aa
AA seq
DB search
MEVDRADGRTANQRRPVVCTRGVLHRAHGSASWAQGETKVIAAVYGPKAGTKKNENPEKA
CIEVIWKPKTGQSGKQEREYEMVLKKTLQSICLLNVHPNTTTSIVIQVVNDDGALLPCAI
NAACSALVDAGIPLKHLAVAICCSVAESGHIVLDPSKLEEQNMKAFIYLVFPNSITSVLP
DGSKRPGGEAMEHGIVTSLTHGVMAVDEYFSCVKLGRAAAAELSDFVRNSLKLKAGNDPS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatagagcagacgggcggaccgcgaatcaacggagaccggtggtttgtact
cgaggcgtacttcatcgggctcatggctctgctagctgggctcaaggtgagacaaaggtg
attgctgctgtttatggaccaaaagctggaacgaagaaaaacgagaatcctgaaaaagct
tgcattgaagtcatttggaagccaaaaacagggcagagtgggaaacaagagagggaatac
gaaatggtactaaagaagacgttgcaaagtatctgccttttgaatgttcatcctaataca
acaacgtcgattgtcattcaggttgtcaatgatgatggtgctcttcttccatgtgcaata
aacgcagcctgttctgctcttgtggatgctggtattcctttaaagcatcttgcggttgca
atatgctgtagtgtagctgaaagtggacatattgttcttgaccccagtaagttagaagaa
cagaatatgaaggcatttatatatttggtctttcccaactcgataacatctgttcttccg
gatggttcaaaaagaccaggaggtgaggcgatggagcacggtattgttacgtccctcacc
catggcgtaatggcagtggatgagtacttcagctgtgtgaagctgggacgtgctgctgcg
gcggagttgtcggatttcgtcaggaacagtttaaagttgaaagctgggaacgacccatct
aaagccggctga
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