Helianthus annuus (common sunflower): 110883931
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Entry
110883931 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110883931
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110883931
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110883931
NCBI-ProteinID:
XP_021987283
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Position
10:8326614..8332413
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AA seq
438 aa
AA seq
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MLLRHIALCLLLIFIHSISTNVVSRLDDENKLQSLTTNSTTADRRIEDIANERNERAVDE
DPERVDSVVAMSIRNSTERRKLGFLSCGTGNPIDDCWRCDRNWQRHRKRLADCAIGFGRN
AIGGRDGRYYVVTDPKHDDPVNPRPGTLRHAVIQDRPLWIIFKRDMVITLKQELLMNSFK
TIDARGVNVHIANGGCITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDA
ISIFGSSHIWVDHNSLSNCADGLVDAIMGSTAITISNNYFTHHNEVMLLGHSDTYDRDKG
MQVTIAYNHFGEGLVQRMPRCRHGHFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPN
NPNAKEVTHRVITAGRWRHWNWRSEGDLMLNGAYFTPSGKGAAASYARASSLSAKPSSFV
GSLTSGSGALVCRRGRQC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttagacatattgctctctgcttattgctcattttcatacattctatttccacc
aatgtcgtttcgagattggatgatgaaaacaagttacaaagcttaacaaccaactcaaca
accgcggataggagaattgaagatattgcaaatgaaaggaatgaaagagcagttgatgag
gatccagagagggttgattcagtggttgccatgagcattcgaaacagcacagaaaggagg
aaactaggatttttatcatgtgggaccggaaacccaatcgacgattgctggcgctgcgac
aggaactggcagcgccaccgcaagcgtctggcagattgcgccattggatttgggcgcaac
gccataggaggccgtgacggacgttactacgtcgtcaccgaccctaaacacgatgacccg
gttaacccccgacccggaaccctacgacacgcggtcattcaagaccggcccctatggatc
atattcaaaagagacatggtcataaccttaaaacaagaactattaatgaacagtttcaaa
acaattgatgctcgtggagtcaatgtccacattgcaaatggtgggtgcatcacaatccaa
tacattacaaatgttattattcatgggttgcatattcatgactgcaaaccgaccggtaac
gccatggttcgaagctcaccgtctcattacggatggagaacgatggcggacggtgatgcc
atttcgatatttggatcgagtcatatttgggtcgatcataactcgctttcgaattgtgct
gatgggcttgttgatgccattatggggtcaactgctattaccatttctaacaactacttc
acccaccacaatgaggttatgttattgggtcatagcgacacctacgatagggacaagggt
atgcaagtgaccatagcatataaccatttcggcgaaggtcttgtacaaagaatgccaagg
tgtagacacgggcatttccacgtggtaaataacgactacacgcactgggaaatgtacgct
atcggtggcagtgcggatcccacgattaacagccaaggaaaccgataccttgccccaaat
aaccccaatgccaaagaggtgactcatagagtaataacagcaggaagatggagacattgg
aattggagatcagaaggtgacttaatgttaaatggtgcatactttacgccatctggtaaa
ggtgcagcggctagttatgcgcgtgcatcgagcctaagtgctaaaccatcgtcgtttgtg
ggctcgcttacttcaggatccggtgcactcgtgtgtcgaagaggcagacagtgttaa
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