Helianthus annuus (common sunflower): 110884202
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Entry
110884202 CDS
T05101
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110884202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110884202
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110884202
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
110884202
NCBI-ProteinID:
XP_021987576
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All DBs
Position
10:22889502..22894055
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AA seq
580 aa
AA seq
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MVYSLPEEVLEHVFSFITSDKDRNAVSLVCKSWYEIERWCRRKVFVGNCYAVSPGIMIRR
FPELRAVELKGKPHFADFNLVPDGWGGYACSWIDEMSRAYPWLEEIRLKRMVVTDESLEL
ISTAFKNFKVLVLSSCEGFSTDGLSAIASNCRNLKELDLRESEVMDLSGRWLSHFPDTFT
SLESLNISCLGSEVSFSALERLVARSPNLKTLRLNRAVPLGKLSTLLHQAPQLVELGTGA
YSSGIRSDVYTGLSKAFLGCKELKGLSGFWDADPSYLPALYSVCSRLTTLNLSYSTIRSP
DITKVIGQCPNLQRLWVLDHIEDSGLNALALSCKNLQELRVFPSDLYAADANITLTEQGL
VSVSQGCPKLQSVLYFCHQMSNSALITIAKNRPNLTCFRLCIIEPRTPDYLTHEPLDIGF
GAIVKHCKNLNRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLK
KLEIRDCPFGDTALLANVAKLATMRSLWMSSCAVSIGACKILSQKMPMLNVEVIDENGSL
DSRLDSCLVEKLYVYRTVAGPRSDMPGYIWTMDRDSANRI
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggtgtactcgttgccggaggaggtgttagagcatgttttctcgttcataacttctgac
aaggaccgcaatgcggtttcactggtgtgtaagtcatggtacgagatagagcggtggtgc
cggaggaaggttttcgtcggaaactgttacgcggtgagtcctggaatcatgatcaggagg
tttccggagcttagggcggtggagttgaaaggaaaaccgcattttgcggattttaatttg
gtaccggatggttggggaggatatgcttgttcttggattgatgaaatgtctagggcttac
ccatggctagaggagattaggcttaagcggatggtggttactgatgagagtttggagttg
atctctactgcttttaagaactttaaggttttggttttatcttcttgtgagggtttcagt
accgatggactttctgctattgcttctaattgcagaaacttgaaagaattggatttgagg
gaaagtgaagtgatggatttaagtggccgttggctaagccactttcccgacacttttacc
tcactcgaatcactcaacatatcctgcttgggttccgaggtcagcttctcagctctcgaa
cgattagttgcaaggtcacccaacttaaagacgcttcgactcaatcgtgcggtaccactt
ggaaagctttctaccttactacaccaggcgccacagctggttgagttgggtaccggtgcc
tactcatcaggaattcggtctgatgtatatacaggtctttctaaggctttcttgggctgc
aaggagcttaagggactgtcagggttttgggatgctgacccatcgtatcttccagctcta
tattcagtttgttctaggctgactacattgaacctcagttattccactattagaagccct
gatatcactaaggtcatcggtcaatgccctaatttgcagcgtttatgggtactagatcac
attgaagacagtgggctcaacgccctagctttatcctgtaaaaacttacaagaactaagg
gtatttccgtccgacctgtatgctgctgatgcgaatatcaccttaacagaacaaggcctt
gtttccgtttcacaagggtgcccaaaactccaatctgttctttacttctgtcatcagatg
tcaaattccgcattaatcaccatcgctaaaaaccgccctaacctaacctgtttccgtctt
tgcataatcgaaccacgaactcccgattacttgacccatgaaccgctcgatatcggtttc
ggagccatagtaaaacactgcaaaaatcttaaccgcctttcgttatccggtctactcacg
gaccgtgtgtttgaatacatcgggacccacgcgaagaaactagaaatgctttctatagct
tttgcaggagacagtgatttaggtctacatcatgttctatccgggtgtgaaagtttgaaa
aagttggagattagagactgtccgtttggtgatactgctttgttggctaacgtcgccaag
ctggcgacaatgcgatccctttggatgtcatcatgtgcagttagtattggggcgtgtaag
atcttaagtcagaagatgcctatgcttaatgttgaagttattgatgaaaatggaagttta
gattcaaggttggacagctgtcttgttgagaagctttatgtatatcgtactgttgcaggc
ccgaggtctgatatgccgggctatatttggactatggatcgagattctgccaatagaatt
tga
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