Helianthus annuus (common sunflower): 110884340
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Entry
110884340 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110884340
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110884340
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110884340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Arc
zf-Nse
Prok-RING_1
Tmpp129
Baculo_RING
PHD_NSD
Prok-RING_4
PHD
zinc_ribbon_16
RINGv
Zn_ribbon_IFT122_C
zf-RING-like
DUF4153
RH_dom
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
110884340
NCBI-ProteinID:
XP_021987738
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Position
7:complement(68632062..68633322)
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AA seq
334 aa
AA seq
DB search
MSSNQKTQTAFSLLILLQLLPHVRSQNPPPPPLYADFNPSIITIIVILIAALFLMFFFTI
YIRRQSTEGGVSIRRALSTRRANAPSRGLDPSVIETFPTFVYSTVKGLKIGKGALECAVC
LNEYEDEETIRLIPKCDHVFHPECIDAWLQSHVTCPVCRANLVPDSVNVVVSDPVSTSVN
EEVVVNVQEQTESVNQSSIIPRLFDKFRSHSTGHSLVQPGENMDRFTLRLPADVRKQVVS
RALLNRNGMVGEGSERNGYRRKSYKRLQSLDRVMVRSERWVMSRAPSFLSRALSIRSPRV
VVAGNSEASTSSTTPKGSKTLDTIPLNNLGPKSC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaatcagaagacccaaaccgcattttctttactaattctactacaattacta
cctcatgtgagatctcaaaacccacctcctcctcctctatacgccgatttcaacccttca
atcattacaataatcgtcattctaatagcagccctgtttctaatgttctttttcacgatc
tacatccgccggcagtcaactgaaggcggtgttagcatccgtcgagctctctccacgcgc
cgcgccaacgcgccgtcacgcggcctcgatccgtcggtcattgagacgtttccgacgttc
gtatactccaccgtcaaaggcctcaagatcggtaaaggggctcttgagtgcgccgtgtgt
ctcaacgagtacgaggatgaagaaacgattaggttgattcctaagtgtgatcacgtgttt
catcctgagtgtattgacgcttggttgcagagtcacgtgacctgtcctgtctgtcgtgcg
aatcttgttccagattcggtaaacgtcgtcgtttctgatccggtttcgacctctgttaat
gaagaggttgtagtcaacgtgcaagagcaaacagagtctgtaaaccagtcttctataatt
ccgagattgtttgacaagttcagatctcattcaaccgggcattcgcttgttcaaccgggg
gagaatatggaccggttcacgttgcggttgcctgcggacgtgaggaagcaagtggtgagc
cgggctctgctgaaccggaacgggatggtgggagaagggagtgagaggaacgggtacagg
agaaaatcgtacaaacggctgcagagcttagaccgggtgatggtgaggtcagaacgctgg
gttatgtccagggcaccctcgtttttgtcacgagcgttatctattaggtctcccagggtg
gtggtggctggtaacagcgaggcgtcaacgtcgtcaaccacgcctaaaggctctaagacg
ctcgatacgattccgctaaataacttgggacccaaaagttgttag
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