Helianthus annuus (common sunflower): 110884484
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Entry
110884484 CDS
T05101
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110884484
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
han04812
]
110884484
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110884484
Cytoskeleton proteins [BR:
han04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110884484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
HEAT_GCN1
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_EZ
HEAT_GCN1_C
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_2
TPR_DNAAF5
TOR1L1_N
Cnd1
Adaptin_N
PDS5
TPR_CAND1
HEAT_Maestro
TPR_IMB1
VPS15-like_hel
INTS1_R4
Tti2
Ltn1_1st
HEAT_DAAF5
UTP20
HEAT_RRP12_N
MMS19_C
DUF4042
MMS19_N
Sec7-like_HUS
RRP12_HEAT
Dopey_N
Motif
Other DBs
NCBI-GeneID:
110884484
NCBI-ProteinID:
XP_021987893
LinkDB
All DBs
Position
6:complement(22312631..22324104)
Genome browser
AA seq
1397 aa
AA seq
DB search
MEEALEMARSKDTKERMAGVERLHELLEASRKSLTSSEVTSLVDCCLDLLKDNNFRVSQG
GLQALDSAAVLSGEHLKLHFNALVPATVERLGDAKQPVRDAARRLLLTLMQVSSPTLIVE
RAGYNAWTHKSWRVREEFARTVTSAIGLFASTELPLQRAILPSILQMLYDPNPGVREAAI
LCIEEMYAQIGPQFREELLRHQLPSSMVKDINARLERIEPKQRSADIRVSTYAPAATPKL
SNHNPKRSSPKAKTSSREASLFAGESDITEKPMDPIRVYSEKELIREFENIASILVPEKD
WSLRIGAMQRVEGLVIGGAIDYSCFRGLLKQLINPLSTQLADRRSSIVKQACHLLNFLSK
ELLGDFESFAEMFIPALFKLVVITVLVIAESADNCIKTMLRNCKVARILPRVAENAKHDR
SAILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVGDAMSEVRSTARSCYRMFSK
TWPDRSRRLFSSFDPVIQRIINDEDGGMHRRHASPSLRDRNLQTSSNTQNSLSSSSLAGY
GTSAIVAMDRNASLPSVASHSSGLFSSQSKSTSKGTERSLESVLHASKQKVSAIESMLRG
LDSGRVRSSSLDLGVDPPSSRDPPFPLAAPASNSLAGSLSLDSTAANGNNRNGGLVLSDI
ISQIQASRDPAKNAYRANARGSEKMKERSSFEGHSEMREARRSVNMHTDRHYLDAPYRDS
HNSHVPNFQRPLSRKNVPGRSASARRRSFDESQFASGEMSSYTDGPASLTDALSDGLSSG
SDWNARVSVFNYIRSLLKQGPKGVQEVVQNFEKVMKFFFQHLDDPHHKVAQAALTTLADI
IPACRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLEIVGKTYSVDSLLLPALLRSLD
EQRSPKAKLAVIEFAIVSFNKHAMNSEGAGNSGILKLWLAKLAPLVYDKNTKLKEAAITC
IISVYSHFDSASVLNYILSLSVEEQNSLRRALKQRTPRIEVDLMNYLQQKKDRQRSKSTY
DPYDVVGTDSEEGYIAVSKKTPMFGRYSGSSIDSDGGKKWGSGPTHESIHITGDDNLYQG
PVLNIDTGSNNGGLVSNAKDTVASWSVRSENLEGNINVEVNSTPRLNGIGSSDNQQGGTG
STPDLELSVSKLASLTIGSSPDTKPGIPQILHLISNGGDECSTATKLTALQQLVDTSVAN
DSSIWTKYFNQILMVVLEVLDDPDPSIRELALSLIAEMLKNQREAMEDSIEIVVEKLLNL
TKDTVPKVSNEAEHCLTVVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQ
EELMGQLQSFLPALFDAFGNQSADVRKTVVFCLVDMYIMLGKGFLPYLEGLNSTQLRLVT
IYANRISQARTGTPIQD
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctctagaaatggcgcgctcgaaggacacgaaagagcgaatggccggagta
gagcgacttcacgaacttctagaagcttcgcgaaagagcttaacgtcttcagaagtcaca
tcgcttgttgattgctgcttagatctcttgaaggacaacaattttagggtttcgcaagga
ggtttgcaggctctggattctgctgcggttctttctggtgaacatttgaagcttcatttt
aatgcgcttgttccggctactgttgaacgccttggtgacgctaagcagccggttcgtgat
gcggctcgtcggcttttgctcactctcatgcaggtttcttctccaaccctcatcgttgaa
agagctggatataacgcctggactcacaaaagctggagagttagagaggagtttgcaaga
actgtcacatctgccattggtctatttgcatctactgagctgcccctgcaacgagctatt
cttccttctatactacagatgttatatgatcctaatccaggtgtgagagaagccgctatc
ttatgcatcgaggagatgtatgctcaaattgggcctcagttccgagaagaacttctgcgc
catcagcttccatcatcaatggttaaagatatcaatgctagactagaaagaattgaacca
aaacaacgttctgcggatattcgagttagtacttatgctcctgctgctacccccaagctt
tctaatcataatcccaaaaggagcagtccgaaggccaagacttcttcgcgtgaagcatcc
cttttcgcaggagaaagtgatattactgaaaagcccatggacccaatcagagtgtactca
gaaaaggagcttatccgtgagtttgagaatatcgcttcaatcctcgttccagagaaagac
tggtcccttcgcattggagccatgcaaagagtcgaaggccttgtcatcggaggtgcaatt
gattattcatgtttccgtggacttctaaagcagcttattaatcctctaagcacacaattg
gctgatagaagatctagcatagttaagcaggcttgccacttactgaactttctatcgaaa
gagctgttgggagattttgagtcgtttgcagaaatgttcattcctgctcttttcaaactt
gttgtgataactgtacttgtaattgcagagtctgctgataactgcataaaaacgatgttg
cgtaactgtaaagtagcccggatacttcctcgtgtggctgaaaatgcaaaacatgaccga
agtgcgatacttcgcgccagatgttgtgaatatgctttgttgatactggaatattgggct
gatgcacctgagatacaacggtcagctgacctttatgaagaccttattaaatgttgtgtg
ggagatgcaatgagcgaggtacggtcaactgctagatcatgctaccgtatgttctcaaaa
acttggcctgatcgatcacgccgcttattttcatcgttcgatcccgtcattcaaaggata
ataaatgatgaggacggtggcatgcatcggcggcacgcgtctccctcgcttcgtgatagg
aatctgcaaacttcatctaatactcaaaactctttgtcgtcttcaagtctagcggggtac
ggaacttccgccattgttgcaatggacagaaacgcaagcttaccatctgtggcctctcac
tcatccggactcttttcatcacaatcaaagtctacaagcaagggtacagaacgtagtctt
gaaagcgtgttgcatgctagcaaacagaaggtttccgccattgaaagcatgcttagaggt
ctagattccggtagagttagatcatcaagtctggatctaggagtcgaccctccttcatct
cgtgatccgccattcccgcttgctgctcctgcttccaatagtcttgccggttctctatca
ctagattcaactgccgcaaacggtaacaatcgtaatggtggcttggtcttgtctgacata
atcagtcagattcaggcttcacgggatcccgctaagaacgcgtaccgtgctaatgccaga
ggttctgaaaaaatgaaagaaagaagctcttttgaaggtcacagtgaaatgagagaggct
agacgatcggtgaacatgcatacggataggcactacttagacgcaccataccgagattca
cataatagtcacgtacccaattttcagcgaccgctatcgagaaagaacgtgcccgggaga
tccgcttcagcgaggcgtaggagctttgacgaaagtcagtttgcttctggagagatgtcg
agttatacagacggtccagcttctctaactgatgctttgagtgacggtcttagttctggt
tcggattggaacgctagggtttctgtgtttaactatatccgttcgttactcaagcaaggc
ccgaaaggagttcaagaagttgtacaaaattttgagaaagtaatgaagtttttcttccag
catctggatgatcctcaccataaagtggcacaagcagctttgacgacacttgctgacatc
attcctgcttgtcgaaaacctttcgaaagttacatggaaagaattctcccccacgtgttc
tctcggttaatcgatccaaaggaatctgtaagacaaccgtgttcgacaactttagagatt
gtcggtaaaacttatagtgtagattcgcttctattaccagccttgcttcgttctttagat
gaacaacgatccccgaaggcgaaactggcggtaatcgagtttgctatcgtttcgtttaat
aagcatgcgatgaactccgagggtgctgggaacagtggcattttaaagttatggctagcg
aaactagcaccattggtctatgacaaaaatacaaaactgaaggaagccgctataacgtgc
atcatatctgtctactctcatttcgattcagcatccgttttgaattacattcttagttta
tccgttgaagaacagaattctttaaggcgggcacttaagcaacgtacaccccgtatagaa
gtggacttgatgaattacttgcagcagaagaaagaccgacaacgctccaaatccacttat
gatccgtacgatgttgttgggactgattctgaagaagggtatatagcagtgtcgaaaaag
actcccatgtttggaaggtattctggaagttcaattgatagtgacggtggtaagaaatgg
ggttcgggtcccacccacgaatccattcacatcaccggtgatgataatctttatcagggt
ccggtcttaaacattgatactggttctaataatggtggacttgtttcaaatgctaaagat
actgtcgcatcatggtctgtccggtcagaaaatttggagggaaatattaatgtggaggtt
aattcgacacctcggctcaatggaattgggagctctgacaaccaacagggtggtactggt
tctacacctgatttggaacttagtgtatcaaaacttgcatctttaacgatcggttcatct
cctgatactaaaccgggcatccctcaaattcttcatctgatttctaatggtggcgatgag
tgttctactgcaaccaagcttactgcacttcagcagttagttgatacatctgtggccaat
gattcctcaatatggaccaagtattttaatcaaattttgatggttgtacttgaggttttg
gatgaccctgatccttcaattcgtgagcttgctctttcattaattgctgaaatgttaaag
aaccagagagaggctatggaagattcgattgagattgtagttgaaaaattactgaatctt
acaaaggacacggtcccgaaggtatcaaatgaagcagaacattgcttaactgttgttctg
tctcaatatgacccattcagatgtttgagtgttattgtcccattgttggttaccgaagat
gagaaaactcttgttacgtgtataaactgtttgacaaagcttgtgggcaggctttcccag
gaggagctaatgggtcagttgcaatcttttttgcctgctctttttgatgctttcggtaac
cagagtgcggatgtacgcaagactgttgttttttgtctggtagacatgtacataatgctt
ggaaaagggtttttgccatatttggaagggctaaacagtacgcagttgcggttagtaacc
atatatgcaaaccgtatatcgcaagcaaggacgggaactccgatccaagattag
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