Helianthus annuus (common sunflower): 110884485
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Entry
110884485 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110884485
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110884485
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF4244
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
110884485
NCBI-ProteinID:
XP_021987894
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Position
6:22302974..22305636
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AA seq
419 aa
AA seq
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MSITLRLLTIFISILLANVVSSGEVKHELKSLVSNSTMAVGDPEVMASKVHMSIRNSTER
RKLGYLSCGTGNPIDDCWRCDQNWQRHRKRLAECAIGFGHSAVGGRDGKYYIVTNPNDDD
AVNPQPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDARGVNVHIANGACITI
QYVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGGSHIWIDHNSLSNC
TDGLIDAVIGSTAITISNNLFTHHNEVMLLGHSDSYTRDKVMQVTVAYNHFGEGLVQRMP
RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPDDPNAKQVTKRVISPGNSDD
WNWRSEGDLMLNGAYFTPSGAEAGDKYAKALSLSAKPSSVVATLTSDAGVLTCIRGRPC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaccctcagacttcttacaatctttatatcgatacttcttgccaatgtcgtt
tctagtggagaagttaaacatgagttgaagagcttagtaagcaattcaacaatggctgtt
ggtgatccagaggtcatggcttccaaggttcacatgagcatccgaaacagcacagagaga
agaaaactgggctacttatcatgtgggaccggaaacccgatcgacgattgctggcggtgt
gaccaaaactggcaacggcaccgcaaacgcctggcggaatgtgcaatcgggttcggacac
agcgctgttggtggtcgtgacggtaaatactacattgtaacaaacccaaacgatgacgat
gctgtgaacccacaaccggggactctgcgacacgcggtcatccaagacgaaccgttatgg
atcgtatttaaacgggacatggtgatcactttaaaacaagagctgatcatgaacagtttc
aaaacaatcgatgcgcggggagttaatgttcatatcgcgaatggagcgtgtatcacaatc
caatatgttacaaacattatcatacatgggttgcatattcatgactgcaagccgaccggt
aacgccatggttcgaagctccccgtctcattacgggtggagaaccatggcggatggggac
gcgatatcgatctttggaggaagccatatttggattgatcataattcattatctaattgt
actgatggtctcattgatgctgttattggctcaactgctatcaccatatctaataattta
ttcactcaccacaatgaggttatgttattgggtcatagcgattcgtatacgcgagacaag
gttatgcaagtgacagttgcctacaaccattttggagagggtcttgttcagagaatgcca
aggtgtagacatgggtatttccatgttgtaaataatgactacacacattgggaaatgtat
gctattggtggcagtgcaaaccccacaatcaacagccaaggaaatagataccttgctcct
gatgacccaaatgccaaacaggtgacaaagagggtaatatcacccgggaattcggatgat
tggaactggagatccgagggagacttaatgttgaacggtgcatatttcaccccgtcaggt
gcagaggctggagacaaatatgcaaaggcactaagcttaagtgccaaaccgtcttctgtg
gtggccacacttacctcggatgctggcgtactaacctgcatccgaggtaggccatgttaa
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