Helianthus annuus (common sunflower): 110885154
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Entry
110885154 CDS
T05101
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110885154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110885154
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110885154
Complex B
110885154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF4072
Motif
Other DBs
NCBI-GeneID:
110885154
NCBI-ProteinID:
XP_021988534
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Position
10:complement(81012511..81024947)
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AA seq
944 aa
AA seq
DB search
MDNNPQNPASQSLRPPAIGSIGSQSFGTNYSMQFRGATVTPQQGQPFMQPGSAAPQYRPV
GQTPLPQYSQLLQQRPGGHPSPSSQPMPMPYMQQPPQFQNQNPGVPLSSSYTFNAPSFGQ
PTNVSSQFHAVSQMHAPVVSSGGQPWMSSANQGPPTVSSVPQTGQQPSTATPPNQQASSA
VDASQEASADWQEYTAADGRRYYYNKRTKQSSWEKPLELMTPLERADASTVWKEFTTAEG
KKYYYNKDTKQSKWTIPEELKLARELAEKEASRGTQSPASITPSALDQASALASANSVKE
VSSSPVAVTPVIPAGNAPPNVASEPSSTVSASANMHSSPLGKTENSSSHGVPKSIDGVSV
QDTEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASKQEAKMAFKALLEESNVKADWNWEQ
AMRVIINDKRYGALKAHGERKQAFNEYLMQRKKVEAEERRLKQRKAKEEFTKMLEESEEL
TSSMRWSKAMALFEDDERYKAVDRPSDREDLFQNYLVDLQKKERAKAQEEQRQNRSEYRQ
FLETCGLIKVDTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEEDEQRKIKKEH
IKRVERKNRDEFRKMLEEHVTSGTLTAKTQWRDYCQKVKESVAYQAVASNTSGSTPRDLF
EDVVEELEKKYHEDKIRVKDSLKSKKVAVLPTWTLEDLKAAIEDDIISSLSDINLQLVFE
DLVERAKEKEEKELKKRLSLVKDFTELLYEIKEITASSSWDDCLPLFEESSEFRAIGDES
AAREAFEEYVARLVEKAKEKERKREEEKARKEEKERRKEKERKEKEKDREEREKEKSKDK
DRSKKDDSDSENLDTVVEHKEDKKRDRKHRKRHQDDVASDKDERDDSKRSRRHGSDRKKS
RKHAYSPESDTESKHKKHKRDSRSKNGGHEELEDGEVGEDGEIQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggataataaccctcagaatcccgcttcacagtctcttcggccacctgcaattggatcc
attggttctcaaagttttggaacaaactactcgatgcaattccggggggctacggttaca
ccacaacagggtcaaccatttatgcagccaggttcagccgctccgcaatatcgtccagtg
ggtcaaactccgttaccacagtattctcaactgttgcagcagaggccgggtgggcacccc
tctccatcatcacaaccgatgccgatgccatatatgcagcagccaccacagttccagaac
cagaaccctggagtacctctttcatcttcgtatacattcaatgcaccgtcattcgggcaa
ccaacaaatgtgtcttctcagtttcatgctgtctcacagatgcacgcacctgttgtttct
agtggaggacaaccttggatgtcttctgcaaatcaaggtccaccgactgtttcatcggtg
ccacaaactggacagcagccttcaaccgccactcccccaaatcagcaggcatcaagtgcc
gtcgatgctagtcaagaggcatcagctgattggcaagagtatacagctgctgatggaaga
agatattattacaacaagagaacaaaacaatcttcttgggagaagcctttggagttgatg
acacctttggagagagctgatgcttctactgtttggaaagagttcacaacggcagagggc
aaaaaatattattacaacaaagatacaaaacaatctaaatggacgatacccgaggaattg
aagctggctcgtgagctggctgagaaagaagcttctagagggactcaatcaccagcctct
ataacaccctctgcactcgatcaagcttccgctcttgcttctgctaactcagttaaagag
gtgtcttcaagccctgtagccgttacacctgtcatccctgctggcaatgctccccctaat
gtggcgtctgagccatcttcaacggtttctgcgagtgccaacatgcattcgtctccattg
ggcaaaacagagaattcgtcttcccacggtgttccaaaatctatagatggagtctctgta
caagacacagaggaagctaagaagggcatggcagctgccggaaaagtgaacacaacgcca
gtagatgagaaagctgcggatgatgagcaatttttatatgctagtaagcaggaggcaaaa
atggcttttaaagctttactggaggagtcaaatgttaaggctgattggaactgggagcag
gcaatgagagtgatcataaatgacaaaagatacggtgcgttaaaagcacatggtgaacgg
aaacaggcattcaatgagtatttgatgcaaagaaagaaagtggaggctgaggagaggcgg
ttgaagcagagaaaagcaaaagaagagtttacaaagatgttggaagagtctgaggaactg
acatcatccatgcgatggagcaaagcaatggcattatttgaagacgatgaacggtacaag
gctgttgaccgaccttctgaccgtgaagatcttttccaaaactaccttgtcgacctacag
aagaaagagcgagcaaaagctcaagaagagcagaggcaaaaccgatctgagtaccgacag
tttttggaaacttgtggcttgattaaggtggatactcagtggcgaaaagttcaggatcgt
ttggaagatgacgaaagatgttcacgccttgaaaaaatcgatcggttggagattttccag
gaatacatccgtgatttggagaaggaagaagatgaacaaaggaaaattaaaaaggaacat
ataaaacgggtggaacgcaaaaatcgtgatgagttccgtaagatgctggaagaacatgtg
acttctggtacacttaccgctaaaactcaatggcgtgactattgtcaaaaggtgaaggag
tcggtagcttatcaggctgttgcttcaaatacatctggctcaaccccgagagatttgttt
gaagatgtagttgaggagttggaaaagaagtaccatgaagataaaattcgtgtgaaagat
tcgctgaaatcgaagaaggttgctgttttaccaacatggacattggaagatttgaaggct
gctattgaggacgacatcatctcatctttatcagatattaatctgcagcttgtgtttgaa
gatttggttgagagggcaaaggagaaagaggagaaggaattaaagaaacgtctgtctctt
gtgaaagatttcaccgagttactgtatgagatcaaggaaataaccgcatcttcttcatgg
gatgattgcctgccactctttgaggaaagctctgaattcagagctattggtgatgagagt
gctgcacgtgaagcctttgaggaatatgttgctcgtttagtggagaaggcaaaggagaag
gaacgtaaacgggaggaagagaaggccagaaaggaggaaaaagagaggagaaaggagaaa
gaacgaaaagagaaagagaaagatagagaagagagggaaaaagaaaagagtaaagataaa
gatcgatcaaaaaaagacgattcagatagtgagaatttagatacagttgtggaacacaaa
gaggacaaaaaacgagacagaaaacatcgtaagcgtcatcaagatgatgtggcgtctgac
aaggatgaaagggatgactccaagaggtctcgcagacatggcagtgaccgcaaaaagtca
agaaagcatgcatattcacctgaatctgataccgaaagtaaacataagaaacacaagaga
gattctcgtagtaaaaatggtggtcatgaggaacttgaagacggcgaggttggtgaggat
ggggaaattcagtag
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