Helianthus annuus (common sunflower): 110885190
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Entry
110885190 CDS
T05101
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110885190
04121 Ubiquitin system [BR:
han04121
]
110885190
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110885190
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110885190
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110885190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-RING_16
zf_RING_Vps8_fungal
zf-Nse
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
110885190
NCBI-ProteinID:
XP_021988570
LinkDB
All DBs
Position
10:118698256..118701611
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AA seq
272 aa
AA seq
DB search
MSSGGNTHWCYQCQRPVRLRGHNPVCPYCSGGFVQELSEVVESGQQDIGPTHTHGPYDYG
YMEPFPVPRNRMMDVFSELVRQRMAGRNPNFEIRRRSGLVPEHGVVPWFIFDGQAPARMS
ANDGFEFFFNGAPPGPRRSNVSNIFMGPGLQELIEQLTVNDGRQGPPPASRSAIDSMPTI
KITNRHLNSDSHCPVCQDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVCRVELPAH
GTSRGSSSGGGEEDGGNSRGRRNPLSFLWPFH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtggcggaaatactcattggtgctaccaatgccagcggccagtccggcttcgc
ggtcacaatcccgtttgtccatactgttctgggggatttgtgcaagaactaagtgaggtg
gtcgagtctggacaacaagacatcgggcccactcacacacacgggccttacgattatggg
tacatggaaccgttcccggtcccaagaaacagaatgatggacgttttttccgagttagta
aggcaaagaatggcgggaagaaatcccaacttcgagatcagaagaagatcagggcttgtc
cctgaacacggtgtggttccgtggttcatatttgacggtcaagccccggctcggatgtct
gccaatgacggattcgagtttttcttcaacggtgcaccaccgggtccaagacggtctaat
gtgagtaatatctttatgggtcccgggttacaggaactaatcgaacaacttacggtgaac
gatggtagacagggcccgccgccagcatcccgatcagcgattgattctatgcccactatt
aagattacaaacagacacttgaactcggattctcactgcccggtctgtcaagataagttc
gagttgggatcagaggctagacaaatgccgtgcaaccacatctaccattcgggttgcatc
gagccgtggttggttcagcataattcttgccccgtgtgtcgagtggagctgccggctcat
ggtacaagtaggggaagcagcagtggtggtggtgaagaggacggtggaaatagtcgggga
aggcggaacccgctatcgtttttgtggccttttcactag
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