Helianthus annuus (common sunflower): 110885408
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Entry
110885408 CDS
T05101
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110885408
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110885408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CREPT
ALIX_LYPXL_bnd
YscJ_FliF
CA109-like
CTK3
Macoilin
Motif
Other DBs
NCBI-GeneID:
110885408
NCBI-ProteinID:
XP_021988790
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All DBs
Position
10:78077497..78085374
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AA seq
488 aa
AA seq
DB search
MSDDVFDAQALSDKLFKLNSSQQSIESLSRSCILQRKKAKQIVEIWHKSFKSAQREQHVS
FLYLANDILQNSRRKGGDFVNEFWKVMPSALKHVIEHGDDNGKNAASRLVGIWDERRVFG
SRVQNLKDEMLGKSPPTQLTSNGKTSNSNPIKIVKRDANSLRLKLAVGGLPEKIMTAFHL
VHDENATEDTALNNCESAVRRFGDLERDIESQGVVPGSSLLDEIQEQENVLQDCVNQLET
AERSRTSLISQLKEALQDQELKLDVIHNQLQVARRQIDDAANLRKKLASPSLPGGEHVTE
EDSKKAAAAAVAAKLAASASSAQMLTSVLSSLVAEEAASISNGFNSSAFNSGLIFPPEKR
PKLEKPMPVSDLTNPDPATSAYFTNNIQTSFPPPPPPLPSSSPANQFVQPSSGLMMGGIP
YAYGPSSLPPPPPLPSQIAMGMMRPGHQPPLQQQQQQSQTSGGYYRPPGIGFYGQNNQPT
PPPPVPRQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgatgtttttgatgcacaggcgttatcagacaagctgtttaaactcaacagc
tctcaacaaagtatagagtcattatctcgttcgtgtattttacaaaggaagaaagccaaa
cagattgttgaaatatggcataaatcatttaaatctgctcagcgggagcagcatgtttct
tttctgtatttggccaatgacattttgcaaaatagtaggcgaaagggcggcgacttcgta
aatgaattctggaaagtcatgccttccgccctcaagcatgttatcgaacacggtgacgac
aatggaaagaatgcagcatcaagactggttggcatatgggacgaaaggagggtgtttggg
tcgcgtgttcaaaatttgaaagacgaaatgcttggtaaaagtcctcccactcagttgact
agcaatggaaagacctccaactctaacccgatcaaaatagtgaaaagggatgccaactca
ttaagacttaaattggctgttggaggtctccccgaaaagataatgactgctttccatttg
gtacatgatgagaatgctactgaagataccgcgttaaacaactgtgaaagtgcggttcgc
aggttcggagatttggagagagatattgaaagtcaaggagttgtaccgggatcttcattg
ctagatgaaatccaggagcaggaaaatgtacttcaagattgtgtcaaccaacttgaaact
gcagaaaggagtaggacttcattgatttcccagcttaaagaagcactccaggatcaagaa
ttgaagctggatgttattcacaatcagttgcaagttgctcgacggcaaattgacgatgct
gccaatttgaggaagaaactggcctcaccttctcttcctggcggtgaacatgtaaccgaa
gaagacagcaagaaagcagctgcagccgcagttgccgcaaaacttgcagcttcagcatcc
tctgcacaaatgcttacatccgttctttcttctctagttgcagaggaagccgcctcaatc
agcaacggctttaattcatccgcattcaattctggtcttatatttcctccagaaaaaaga
cccaaactagaaaaaccaatgccggtttcagatttaaccaatcccgatcccgctacttca
gcctattttactaataatatccaaacatcatttccacccccacctcccccactaccatca
agttctccggcgaatcagtttgttcagccttcttctggtttaatgatgggtggaataccg
tatgcgtacggtcctagcagcctaccgccgccgcctcctttgccatcacaaattgcaatg
gggatgatgaggcccggccaccagccgcctctgcagcagcagcagcagcagtctcagact
agtggcggatactataggcctccgggtattggattttacgggcaaaacaatcagcctacg
ccaccgccacctgtgccccggcagtga
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