Helianthus annuus (common sunflower): 110885447
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Entry
110885447 CDS
T05101
Name
(RefSeq) uncharacterized protein LOC110885447 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110885447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110885447
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110885447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110885447
NCBI-ProteinID:
XP_021988826
LinkDB
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Position
10:98741800..98760181
Genome browser
AA seq
1874 aa
AA seq
DB search
MASVDASLWWDPFTDLLTDLENLSPSSELPISLANKLKENHLWLLNSVSLFKPPSQKSKE
ALDSQQVQIGSHRLTVQTKFKELALKISSSLCLDEVQSYILVERSCEHDTSDIVALEPLH
LKVMIQYYIERQCVLKCTRHLLMLSLYVEDGSKADSSVREMVLKLISDGLESRLLSVIES
LLSATYPESMEVDFFTLWAEEMLIEDNLILDILFIAYYESFCTCDGKQWKNLCLLYERMI
SGSCNFGKLAISTEAVKSVYHARVQLLLILIETLYLENILQMVHDETPFSQGNISFALSD
IQEVDAIISSLDPFETKEAGPLILAWAVFLCLISSLPEKPEYNMITQETDHVGYVRQAIR
AASLNYFDEILQSDLLKDSEGPIASSRSVLRTFFSAFIASYEISLQLEDNNLKLILNILG
EIYRGEESLCVQFWDRDSFIDGPIRCLLYNLEGEFPFRTVELISLLSALSEGAWPAECVY
NFLDKSVGLSTLVELRGNFGVDNNSRIIETRLPLCVPGFEGLEIPRDTRGRVLKFIDDNT
ALVRWEYNQSGVLVLLLRVAQEMYPDGSEEVLVILDLISRLVTFNKAVCHSLLSIGDTIH
DRDIRLNVAEIICTLIKNLSPTVSGALMMSSGVNILAMMLNCSPSHVTPTILKTNIFDVS
IRMNSFNDGPDGLSSGSWLLSGRLAKLLVVDCEHNDSSCPLAVSVLELTFQLLQKGIEND
FLLALTVFSIQYVLINHEYWKYKVRHSRWKVTLKVLDVLKTCIVSISHSPKMGEIIRDLL
LSDSSVHNALFRIVCITTPTLENLYVSRLYDLAEIEGLQLAICSVLDIFCMLSDLFKDTL
PGYQVFHQAVLSPTTKPIPVITAIVSLISFFRNPKIQLGAVSALSTLLLTAEDLQPYMSG
NACFGLDDKQIADFRNSSITIISDRSFSHEDLIVNTFKMLASAAYYQPALLVALIDLKDS
TTDDKFDSVGPNREDLLDALCLYVEKSGEMIKSHPKILLNFLDLLMALWQGAPQFINILA
RLKKSGVFLKQLSSCISPEDHHLLSSDSLIASYRYQCQSDILQIMSLEMFLQNKLLHAEN
IRKDIVGKASNGEKTENGSRDILSSWCKNSVLNNLVKSYASCEYDNDKYLKGQISAALFS
VQVFSKLRNGHTGSLSVSLVEKISILGKKLLDLPAFSELVTQYGQQGYSEGKEPKSLILS
DLYYHIQGEYEGRKLEHQLFKALFQFLLESKLLESYKTKDGSNLSIHAKDVLLFDCARLE
KDLGIELWDVLEFKDVKAVAQTMLTHMKEVNSMLLLSNCKLSALKALTTMLPLYDEDVTI
GGRLSEQLIGSCIQLICRSVDKATESSVLDFLAAQVELLHNFIRFVKKMSLSSSILVIKT
VGSSLKTLKDLKNPSSVDLKSTIKLLLTLLLSTVGSINNESEVSDVYVRLLPILCTFSEP
NDYCTLSLATIDILLKRIQTPSIWFPIIQNHLHVQTIVKKLHDKTYLPSVPVILKFFLTF
ALVKEGAEILANSGFFTSLRNLLENGNESETAQIENPERVWGLGSAVVSMIIYSLKDTDM
VDYVISCFMLEKSDLISYCLTTPNFPPDVSDRKKRARAPRKQPSLSALNETQHTLVLLCV
LAKHHNLWSKTMKETDPQLREMSIRLLSFISRGRHLAENSPLLCHPTLKEELEWHKKPSF
INSKSGWFSFSSALTLSSSTALVVVKDTSAGNIDVPHQTMFSDMAAIEVYKIAFHLLSFL
CLQAAAAAKRAEDLGFVDVAHFPDLPMPDILHGLQDQGIGVVRELCEANRMTSEIKGVCV
LLLQIIEKSLYLEFCVSQVCGIRPVMGRIEDFSKEIKLLFAATTGHAFLEETVKSLKQIT
LYVYPGLLQTEGCL
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcgacgcctcactatggtgggatcccttcacagacttactcacagatctc
gaaaacctttctccttcatctgaactcccaatttctctggcgaataagttgaaggaaaac
cacttgtggttgttgaactctgtctccttgttcaagcctcctagtcagaaatcgaaagag
gcgttggattctcaacaggttcaaataggctcacaccggttaactgtacagacgaagttt
aaagaattggcactgaagattagttcctcattgtgtttggatgaggtgcaatcttatata
ctggttgagagatcatgtgaacatgacacatctgatattgtagctcttgagccacttcat
ctgaaggttatgattcagtattacattgagcgacaatgcgtgttgaagtgcacccgccat
cttctcatgctatctttgtatgttgaagatggctcaaaagcagattcttctgtgagggag
atggtgctgaagttgatatctgatgggttggaaagcagattattgtctgttatcgagagt
ttattgtctgccacttatcctgaaagcatggaggtggattttttcactttatgggctgaa
gagatgctgattgaagacaatttgatcttagatattctttttattgcttattatgaatcg
ttctgtacatgtgatggtaaacaatggaagaatttatgtttactttatgagaggatgata
tctggatcttgtaattttggcaaactggccatatcaactgaagctgtgaaatctgtatat
catgctagagtacaattgctgcttattctaatagaaactctttaccttgaaaatattctt
caaatggtccatgatgagactcctttcagtcagggaaatatttcttttgccttgagtgat
attcaagaggtggatgcgattatttctagtcttgatccatttgagactaaagaagcaggc
ccattaattttagcctgggcggtgtttctatgtcttatttcatctcttccagaaaaacca
gaatataacatgattacgcaggaaaccgatcacgtgggttatgttcgtcaagccatcaga
gctgcatcactaaattattttgatgaaattcttcaaagtgatcttttgaaggattcagag
ggtcctattgctagttctcgtagtgttttgaggactttcttctctgctttcatagcatcc
tatgagatcagccttcagttagaggataataatctcaaactgatattgaatatccttgga
gaaatctaccgaggagaggagtcactttgtgttcagttctgggacagagacagcttcata
gacggtcctattcgttgcctgctttataacttagaaggtgaattcccttttaggaccgtg
gaacttattagcttattgtcagctctctctgaaggagcgtggcctgcagaatgcgtgtat
aattttcttgataaatctgttgggttgtctactttggttgagctaagaggcaactttggg
gttgataataattcaagaatcattgagactcgattgccactttgtgttcctggatttgaa
ggcctcgagataccaagggatacgcggggtcgtgtgttgaagttcattgatgataacact
gcccttgtgcggtgggagtataatcaatctggagtgcttgtgcttcttttgcgtgtggcg
caagaaatgtatccagatggttctgaggaagtccttgttattcttgatttgattagccga
cttgtcacatttaacaaggctgtgtgtcattctctgctgagtattggtgatacaattcat
gacagagacataaggttaaatgtggctgagatcatatgcaccttgatcaagaatctttct
cctaccgttagtggagcattaatgatgtcaagtggtgttaacattctggcaatgatgtta
aattgctccccatctcatgttactccaactattctgaagaccaatatttttgatgtttct
ataaggatgaattcttttaacgatggccctgatggattatcaagtggctcctggttgctt
tctggaagacttgctaaattactagttgtcgactgtgagcataacgacagttcgtgccca
cttgcagtatcagtgttggagctcacctttcagcttttgcaaaaggggatagaaaatgac
ttcctcctggctcttactgttttctcgattcagtatgttcttataaatcatgaatattgg
aaatacaaagtgagacattctcgttggaaggtgacattgaaggtgcttgacgttttgaag
acatgcattgtgtcaatctcacactccccaaaaatgggagagattattcgtgacttattg
ctctccgattcttcagttcacaatgctctttttcgcatcgtttgtataacaacaccaact
ttagagaatctttatgtcagccgcctgtatgatctagcagaaattgaaggtttgcagcta
gcaatttgctctgtattggatattttctgcatgctttctgatctttttaaggatactttg
cctggctatcaagtgtttcatcaagcagtgttgtcacctacaaccaaaccaattccagtg
attacagctatcgtctctcttatatcattctttcgaaatcctaagatccaattgggtgct
gtgagcgctctctctacgttactcttgactgctgaagatttacagccgtacatgtctgga
aatgcatgttttggtctggatgacaaacagattgcagattttagaaattctagcattacg
ataatcagcgaccgatctttttcacatgaagatctcatcgtcaatacgtttaagatgctt
gcttcagcagcctattaccagcctgctcttcttgtagcactaattgacttaaaggatagt
acaactgacgataagtttgactctgtgggaccaaatagagaagatctacttgatgctctt
tgtttgtatgttgaaaaatccggtgagatgataaaaagtcatcccaaaatattgctgaat
tttttggatttgttgatggcattgtggcaaggagctccccaattcattaatattctggcc
cgtttgaagaagtctggagtttttttaaagcagttgtcaagctgtatctcaccggaagat
catcatcttttaagttcagactctttaatcgcatcgtacagatatcagtgccagtctgac
attttgcaaatcatgtctcttgagatgtttttgcagaacaagttattacatgccgaaaat
atcagaaaagatattgttgggaaagctagtaatggtgagaaaacagaaaatggttcaaga
gacatattatctagctggtgcaagaactcagtcctgaataacctcgttaagtcatatgct
tcgtgtgaatatgacaatgacaagtatcttaaaggacagatttctgcagctctattctct
gttcaagttttttcaaagttaagaaatggtcacactgggagtttgtctgtatcattagtt
gaaaaaataagcattttgggaaaaaagttacttgatctacctgcattttctgagttggta
actcaatatggacagcaaggttatagtgaaggaaaggagccaaagagtttaatattaagt
gacctgtattaccacatacaaggagaatatgaaggtcgtaagctagaacatcagttattc
aaagcgctgttccaatttcttttagaatccaagttgttggaaagttacaaaactaaggat
ggttctaacttgtcgattcatgctaaggatgtcttgttattcgactgcgcccgtctagaa
aaggatttgggaatcgagttatgggatgttttggaatttaaagacgtgaaagcagttgcg
caaacaatgttgactcatatgaaagaagttaattctatgttgctgctcagcaattgcaaa
ctttctgctttgaaggcattgacaactatgttgcctctgtatgatgaagatgttactatt
ggtggaagactttctgagcaactaatcggttcttgcatccaacttatatgtcggtctgtt
gacaaagccacagaatcatcggtccttgattttcttgcagctcaagtagaattacttcac
aatttcatcagatttgtgaagaaaatgtcgttatcttcttcaatacttgttataaaaaca
gtaggttccagtttaaaaacattaaaagacttgaagaatccatcgtctgtcgatcttaaa
tcgacaatcaagcttttacttaccctacttctctctaccgttggatcgatcaacaatgaa
tccgaggtgtcagatgtgtatgtgaggcttctaccaattctctgcaccttcagtgaacca
aatgactattgtaccctttcattggctacaatcgatatacttctgaaacgtatccagaca
ccttctatatggttccccatcatccagaaccatctacacgtacagactatcgttaaaaag
cttcatgataaaacctatctaccttcggttcccgtgatactaaaattctttttgacgttt
gcactcgtgaaagaaggtgcagagatactcgctaactccggattctttacatctttacga
aatttactagaaaacggaaacgagtctgaaaccgctcaaattgaaaatcctgagcgtgta
tggggtctcgggtcggctgtggtgtcgatgattatctactcattgaaggacaccgatatg
gtggattatgtcatttcttgttttatgttggagaaatcagatttaatttcttattgtttg
actacaccaaacttcccgcctgatgtcagcgacagaaaaaagagagcccgtgctccgcga
aaacaaccgagtttgagcgctcttaacgaaacgcagcatacccttgtgctattgtgtgta
ctagccaaacatcacaacctatggagtaaaaccatgaaagaaacggacccacagttacgt
gaaatgagtatccgtttgctatctttcattagtaggggcagacatcttgcagaaaacagt
ccattactttgtcatcctactcttaaagaagagctcgaatggcacaagaaaccgtctttt
ataaacagcaaaagcggttggttttctttttcttccgctttaacattatcatcatcaact
gcacttgtggtagttaaggacacgtcggctggaaacattgatgttcctcatcaaacaatg
ttctcagacatggctgcaattgaggtttacaaaattgcatttcatcttttgagttttttg
tgcttgcaagctgctgcagctgctaaaagagccgaggatttagggtttgttgatgttgcc
cattttcccgatctgcccatgcctgatatcctacatggcttgcaggatcaaggaatcggt
gtcgttagggagttatgcgaagccaacagaatgacttcagaaataaagggtgtctgcgtc
ttacttttacaaataattgaaaaaagtttgtacttggaattctgcgtttcacaagtttgc
ggtataagacctgtgatgggacggatcgaagatttttcgaaggaaatcaaattattgttt
gcagcaactacagggcatgcctttcttgaagaaacagtgaagtccttgaaacaaataaca
ttgtatgtttacccgggattgttacagacagaagggtgcttgtga
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