Helianthus annuus (common sunflower): 110885889
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Entry
110885889 CDS
T05101
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110885889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
han03000
]
110885889
03021 Transcription machinery [BR:
han03021
]
110885889
Transcription factors [BR:
han03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110885889
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110885889
RNA polymerase III system
TFIIIB
110885889
RNA polymerase I system
SL1/TIF-1B
110885889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
110885889
NCBI-ProteinID:
XP_021989299
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All DBs
Position
10:complement(152220189..152226628)
Genome browser
AA seq
200 aa
AA seq
DB search
MADQVMEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaggtgatggagggtagccagccggttgatctttccaagcacccttctggg
attgttccaactcttcagaacattgtttctactgtcaatttggattgtaagctagacctg
aaggctatcgcgttgcaggctcgaaatgctgagtataatccaaagcgttttgctgctgtt
attatgagaataagagaaccaaaaacaacggctttaatctttgcttctgggaagatggtt
tgtaccggagccaagagtgaacagcagtcaaaactagccgcacggaagtatgctcgaatc
attcagaaacttgggtttccagctaaatttaaggatttcaagattcaaaatattgttggt
tcttgtgatgttaaatttcccatcagacttgaaggcctcgcgtactctcacggtgctttt
tcaagttatgaaccagaactgttcccgggattgatttatcgaatgaaacaaccgaaaatt
gttttgctcatctttgtttctgggaaaattgttcttactggagccaaggtcagggatgag
acttacactgcattcgagaatatatatccggtgttgactgaattcaggaagaaccaacaa
tga
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