Helianthus annuus (common sunflower): 110886540
Help
Entry
110886540 CDS
T05101
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110886540
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110886540
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110886540
03036 Chromosome and associated proteins [BR:
han03036
]
110886540
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110886540
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110886540
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110886540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
110886540
NCBI-ProteinID:
XP_021990044
LinkDB
All DBs
Position
10:169150685..169161862
Genome browser
AA seq
518 aa
AA seq
DB search
MNGGDGGGGVAAAPADPPPPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGD
RGGRVVLFERTDTKENGGSRKDLETIDYATSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVASMNMDPSKAVGKSNIGSSSVSS
STNSHLANGGYKDTSSTNLINDFKFPPGGIPSLRLPVVTYNETSLVTKCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITCAEFHPTHC
STLAYSSSKGSIRLIDLRQSALCDKHSKLFEEHEAPGSKSFFTEIIASTSDIKFGRDGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHDHLRPKLCDLYENDSIFDKFECCLSGDGQRVAT
GSYSNLFRVFGCAPGSNESTTLEASKNPMRRQVQTPSRPSTLSSLTRAVRRGGGGESSGV
DANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggaggaggaggtgttgcggcagctccggcggatccaccaccgccg
cttgactggaaattctcgcaggtgtttggtgaacgaaccgccggtgaagaagttcaggaa
gtggatatcatctcagcaattgagtttgataaaagcggtgatcatcttgcaactggcgat
cgtgggggcagggtggtattatttgagagaacagatacaaaggagaatggtggaagtaga
aaggatttagagacgattgattacgctacaagtaggcatccagagttccgttacaaaact
gaattccaaagccatgaacctgagtttgattatttaaagagtttggagattgaggagaaa
attaacaaaattagatggtgccaaacagccaatggtgccctttttcttctgtcgactaac
gataaaaccattaagttctggaaggttcaagagaagaaagtcaagaaagttgcaagcatg
aatatggacccttctaaagctgttggaaagagcaatattggcagttcaagtgtttcatca
agtactaattctcatcttgcaaatgggggatacaaagatacatcgtccactaatttgatc
aacgacttcaaatttcctccaggtggcatcccatcactgcgtctacctgtggtgacttat
aatgagaccagtcttgttacaaaatgtagaagagtgtatgctcatgcacatgattatcat
atcaattcgatctcaaataacagtgatggcgaaacgttcatctcagctgatgatcttcgg
ataaacctttggaatttggaaattagcaatcaaagtttcaatattgttgatgtcaagcct
gccaacatggaggatcttacagaggtgattacatgtgctgagtttcatccaactcactgt
agcacactagcttatagtagttcaaaaggatccattcgcctcattgatttgcgtcagtca
gcgttatgcgataaacattctaaattgttcgaggaacacgaagcacctggttctaaatcg
tttttcacagagataatagcgtctacctctgatattaagtttggaagggatggaagatat
atacttagccgtgattacatgacccttaagctatgggacatcaacatggactctggtccg
gtttcaacattccaggtgcatgaccatttaagacctaagctatgtgatctatatgaaaac
gattcaatcttcgataaatttgaatgctgtttgagtggtgatggccagcgagttgcaact
ggttcctacagtaatttattccgcgtgtttgggtgcgctcctggcagtaatgaatctact
accttggaagctagcaaaaacccaatgaggagacaagtgcagacaccttcaaggccttcc
accctaagcagtttaacccgtgcagttagacgaggaggaggaggagagagctcaggggtt
gatgcaaacgggaattcatttgatttcacaacgaagctgctccacctggcgtggcatcct
agtgaaaactctatagcttgtgctgctgctaacagcttgtacatgtattatgcctga
DBGET
integrated database retrieval system
