Helianthus annuus (common sunflower): 110886738
Help
Entry
110886738 CDS
T05101
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110886738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110886738
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110886738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_14
TPR_1
SRP_TPR_like
TPR_17
TPR_8
TPR_16
ARM_TT21
TPR_10
DUF627
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
110886738
NCBI-ProteinID:
XP_021990268
LinkDB
All DBs
Position
10:complement(174968161..174975833)
Genome browser
AA seq
764 aa
AA seq
DB search
MESLSVASSASDSDLISVTQSLAKEAYVLFQLGKYVDCLKVLNQILDKKADDPKVLHNIA
IVENFQDGFSNPKRFLEVLDNLKKRSERPAHSTGENAEVLNSRIKSVGNKGNKGIAADEF
DVSVTMFNIAVILYHLHEYEKCFSILERLYQNIEPIDERVARHVCLLLLDVSLVCHHASR
AADVIGYMERVGGNNLVNQGDSGNISQQQLTNLVIKSTSAPNNVMLSSDPINSDQTVSTN
GPESPLSRTPSEETLENLMMEINTRPSNDLSKIQTDESFISTPDLRMKVHLYKVWILILT
RNLKAAKREVKMAMNVARGKDYSLALFLKSQLEYARNNHRKAIKLLMASVSQTETGTSAL
YYNNLGCIYYQLGKYETSAIFFSKALGTSSPQRKEKTMKLFSFSQDKSVLFAYNCGLLYL
TSGKPVLAVRCFQQAGSVFFKRPLLWLRIAECCIMFSEKKADIDVKIVGRGKWRQLVVER
WNLTNVVQVDPDLSLAFAKRCLLNALHLLDCPYENLNPQPNSNMVNSNGEAKETKVGNSS
GNPNPLLQSSVNEYEALCGKENLMILQAVLADLAFVYLELGNAVKALAAAKCLLKLPECS
RVYAFLGNVYAAEAYCLLNQPKLASEHLSSYISGQNSNNIELPYTQEDYNIWQSKKTVDL
DEPNSNNAPTVDQSLPQGGSDSWFLKPEEARGVLLADMAAMAAAEGDMERAHEAVTLALS
LLPNNPEVVLTATYVDLIRGNSQGAVLKLKQCSRVRFLDLSPGH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgttatcagtggcatcttcagcgtccgattccgacttgatttcggttacgcaa
tcgctagcgaaagaggcgtatgtgctgtttcagttagggaagtatgttgattgtttgaaa
gtgttgaatcagatcttggataagaaagccgatgatccgaaggttcttcataacattgct
attgtggagaactttcaagatggattttcaaatccaaagagatttttggaagtactagat
aatcttaagaaacgaagtgagaggcctgctcattcaactggagaaaatgcagaggtgttg
aacagccgaatcaaatcggtgggaaataagggaaataagggcattgcagctgatgagttt
gacgtttccgtgacaatgttcaacatagctgtcattctctatcatctacatgaatacgag
aagtgtttctccattttggaaagattatatcaaaatatcgaaccgattgatgagagggtg
gcacgtcatgtatgcctcctgttacttgatgtttctttagtatgccatcatgcttcaaga
gctgctgacgtgatcggttacatggaaagagtaggtggcaataacttagtcaatcaaggt
gattccggaaacatctctcagcaacaattaacaaacctagtgataaaatccacgtcagca
ccgaacaacgttatgttatcttccgatccaatcaactctgatcaaactgtcagcacaaac
gggcctgaaagcccattatctcgaactccatcagaagaaacactagaaaacctaatgatg
gaaatcaacacaagaccatcaaacgatctctcgaaaatccaaaccgacgaatcgtttatt
tcaacgcctgatttacggatgaaggtgcatttatacaaagtttggattcttattctcaca
agaaatctcaaagcggccaaacgtgaagtgaaaatggccatgaatgtcgcacgcggaaaa
gattattcactcgcgttgtttctaaaatcccaactcgaatacgctagaaataaccaccga
aaagctataaagctgttaatggcgtctgtaagtcaaaccgaaaccggaacctcagcgttg
tattacaacaatctcggctgcatttattatcaactcggtaaatacgaaacgtcagccatc
tttttctccaaggcgctcggaaccagctctccgcaacgaaaggagaaaacgatgaaactg
ttcagtttttcgcaggataaatcggttctttttgcttataactgcgggttgctttatttg
accagcgggaaacctgtacttgcggttcgatgtttccaacaggcgggttcggttttcttt
aaacggcctcttttgtggcttcgaattgccgagtgttgtataatgttttcggaaaagaaa
gcggatatcgacgtgaaaattgtcggtagggggaaatggagacaacttgttgtagagcgt
tggaatttaacaaatgtggtgcaggtggaccccgatctttcactcgcgtttgctaaacgt
tgtcttctgaacgcgttacacttgttggactgcccttatgagaacttgaacccgcaaccg
aactcgaacatggtgaattcaaatggcgaggctaaagagacgaaggtggggaacagtagc
gggaatccgaatccgttgttacagagttcggttaacgaatacgaagctctttgcgggaaa
gaaaacctgatgatcttgcaagccgtgcttgctgacctggcgtttgtttatctagaactc
gggaatgcagtgaaggcgttggcggctgccaagtgtcttttaaaacttccggaatgttct
agggtttacgcgtttctcggaaacgtttacgcagcggaggcttactgtctcttgaaccag
cctaagctagcttccgagcatttatcgagttatatttcagggcaaaatagtaataatatc
gaattaccatacacccaagaggactataacatctggcaaagtaagaaaaccgtggatctc
gatgaaccaaattccaataacgcccctacggtggatcaatcgttacctcaaggaggttcg
gactcttggttcttgaagccggaggaggctcgtggggtcttgttggctgacatggcggcc
atggcagcggctgaaggtgacatggagcgggcccacgaggccgtgacactggcattgtct
ttactacccaacaatccggaagtcgtgttaacggcaacatacgtagacttgattcgcggg
aacagtcaaggtgcggttttgaagttgaaacaatgcagtcgtgttagatttctcgattta
tccccgggacattag
DBGET
integrated database retrieval system
