Helianthus annuus (common sunflower): 110886781
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Entry
110886781 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110886781
03041 Spliceosome [BR:
han03041
]
110886781
03036 Chromosome and associated proteins [BR:
han03036
]
110886781
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110886781
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110886781
mRNA cycle factors
Common to processing body (P body) and stress granule
110886781
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110886781
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110886781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110886781
NCBI-ProteinID:
XP_021990313
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All DBs
Position
10:complement(176127186..176131544)
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AA seq
579 aa
AA seq
DB search
MSYSYGQKPPRQPGRPTYLPPYQRPTHIPDQTSSRIGVRQHNYHHRTNPNQYDTVLQNFN
QMKLTEHEQQETTNTGINFDAYEDIPVEITGSDVPKPVNTFSEIDLGHVLNDNIKNRCKY
VKPTPIQRHAIPVALAGRDLMACAQTGSGKTAAFCFPIISGVMKTTSSLPSYGRRETVAF
PLALVLSPTRELCCQIFEEAKKFCFQTGVKVAVVYGGAPVYPQLRNLERGVDILVATPGR
LTDMIERSKVSLAKIKYLALDEADRMLDMGFEPQIRKIVERLDMPPCGRRQTMLFSATFP
TEIQRMASDFLKNYIFLSVGRVGSSTDLILQKIVFVEDSEKRDYLRNLLHDQKAKGNLGK
NALTLIFVETKRSADSLENWLCRMGFPATAIHGDKVQFERERALRSFKNGATPILVATDV
ASRGLDIPRVAHVINFDLPRDIDSYVHRIGRTGRAGKSGLATAFFNAKNSIVAKPISELM
KEAHQDAPGWLDQYAESHSSSSDYRRGSSKFGGRDFRSGNDGSYGNEDYGTTAAYGGNAD
YGGTSYGGYDDYAPPIVAAGVSDSYGGFGGGGGGYSGWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcatactcctacggtcaaaaacccccacgtcaaccgggtcgacccacctacctccca
ccctaccaacgacccacccacattcccgatcaaaccagttctagaatcggtgtacgacaa
cacaactatcatcatcgaacaaaccctaaccagtacgacaccgttttacaaaactttaac
caaatgaaacttactgaacatgaacaacaagaaaccaccaacacgggtatcaatttcgac
gcgtatgaagacatacccgtcgagataaccgggtcggacgtacccaaacccgttaacacc
ttctccgaaatcgatttggggcacgtgcttaatgataatatcaaaaaccggtgtaagtat
gtgaaaccgacgcccatacaacgtcatgcgattccggtagctttagctggtcgtgacttg
atggcgtgtgctcagaccgggtccggtaaaacggcggcgttttgttttccgattattagt
ggggtcatgaaaacgacgtcgtctctgccgtcgtacggtcgtcgggagactgttgcgttt
cctcttgctcttgttttgtctcccactagagaactttgctgtcagatttttgaagaagct
aagaaattctgctttcaaactggtgtgaaagttgctgttgtttatggtggtgcaccagtt
tatcctcagttgaggaatttagaaaggggtgtggacattttagttgctacaccaggaaga
ttaaccgacatgatcgaaagatcaaaagtttcgcttgcgaaaatcaagtatttggctcta
gacgaagccgatcgaatgctggatatgggatttgaaccccaaatcagaaagattgtcgag
cgtttggatatgccgccttgtggtcgtcgacaaacaatgctgtttagcgcaacttttccg
actgagattcaaaggatggcgtccgattttcttaagaactacatatttctgtccgtcggt
cgagttggttccagtactgatttgatcctgcaaaagattgtgtttgttgaggattcggag
aaacgtgactatttacgcaatcttcttcatgatcagaaagcaaaaggaaatctggggaag
aatgcattgactttaatctttgtggagactaaacgaagcgcggattctttagaaaattgg
ctatgcaggatgggtttccccgctaccgcaatccatggagacaaagtccaatttgaaagg
gaaagagccttgcggtcgtttaaaaatggtgcaactccaattttggtggctactgatgtt
gcgtcaagaggactggatatccctcgggttgctcacgtgataaattttgatctgccacgg
gacattgacagttatgttcataggattgggagaaccggccgggctggtaaatctggtcta
gcaactgcttttttcaatgctaagaactcaatcgttgctaaaccgatttctgagcttatg
aaagaagctcatcaggatgcaccgggatggcttgatcagtacgctgaaagtcattcgtct
tctagcgattatcgtcgtggttctagcaaatttggcggtcgggatttcaggagtggtaat
gatggttcgtatgggaatgaagattatggcacgactgcagcatacggtgggaatgcagat
tatggtggtacttcttatggcggttatgacgattatgctccgccgattgtggctgcgggc
gtttctgattcgtatggtggttttggcggcggtggtggtggatatagtggttgggactaa
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